Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00721 ATGGAAAATACAGTAAAAAATTCGCATGACAAGGAATTTCAAAAGAAGTCGAGATCTTTGGATCTTAAGAGTTTGTACAGACCTAATGTGACTGAAGTGGATGAAGAGAAGAATGTGAAGAGAAAGATAAGTGCTGACGATGGGGATGTGCAAAGAGTGAAGAAAATTAGAAAGAGGTTGTCCATCAGCAGTTTAAGAAATGGTAGTAGTAGTAAAGGCAGAAAAAGCTTGGATGAAGTGTATGATGGTGCATTGGATAGACGGGGTTCAAGTGATATATCCGATTTAAATCAGAAGTCAAATAGAAGCAGTGGGATTGAAAAAAATCGCCTTGGTTTTGATGAAAATGATATGCAAATTCCAAAGCGTAAGAGGGGGCTTATAGGGCGAAAGAAATTGGTGGCTGATCAGGTGTCAAAGGCAGTGAGACAGTCTGATTGTAAAGAGGATCTTGTTGATCATACTGTTAAATTAAATGGCAAATGTTCAGTTGCTAGGAATGACTCTTGGAAGATTAAAGAAAAGAAGTGTGATGATAATCTCAAGGAAAATATCAAAAGTACAGTAAATTCAACTTGTCATTTGAAGGAGGAAGATGGGCATGGCTATGAATTCGATGTAGAAAACAAGGATTTGCCTTTGAAGAAGTCTCGAAGGAAATCTAGAAAAGCAAAATTTGTGCTAGAGGGTTCTGGGGAGGCAGAAGTTTCTGCTGGTACTTCTACAAAGAAATGCAATTATTCCCAAGAAGACGAGGAAGAGAATCTCGAGGAGAATGCTGCAAGAATGCTATCTTCGCGTTTTGATCCTAGTTGTACGGGTTTTACAGCAAACAGCAAGCCCTTTGCAAATGGGTTGTCTGTTTTTGTGTCAAATGGACATGAGATCGTTAGTCAACATTCCAAGTCTTCAAATGGAGTAGAATATGAATCCGCCGATGGTTCAGGTAGAATATTGAGGCCAAGGAAACTGGGCAAGGATAAGAAGCGTAGAAGAAAGAGGCGCCATTTTTATGAAGTTTTTTACAAGGACTCAGATGCATACTGGGTGTTGAACCGGAGAATTAAAGTGTTCTGGCCTTTGGATCAAAGTTGGTATTTTGGTCGCGTAAATGACTATAACAAAGAAATAAATCTCCATCATGTCAAGTACGATGACCGTGAGGAAGAATGGGTTGATCTCCAAAATGAGAGGTTTAAACTCTTGCTACTTCCCACAGAAGTTCATGGTAAGGATTCAAGGAAGAAAACCATGGCTGCAGATAAGATTTATGATACTAGAACCGAAGGAATGCAGTACAGAAAATGTAAAGAAAGAAAAGATTTGACTATTAAGGATGAGGGCTGTGGTACTTATATGGATTCTGAACCCATCATCTCTTGGTTGGCTCGATCTTCTCATCGTGTCAAATCTTCCTCTTCACATGTGTTAAAGAAACAGAAAACTTTTGATCCAGGATCAAAGTTGTCTGAGAAAGCTTCAAATGTACATGAATATTCAAATGAACATTCCTTAGGAAGTTATAAAAACCATTTTTTATGTAAAAATGATTTTCTAGAAAGAGTAGGATCATTAGCTGAAAGGGAAAGGTCAGGAATGTCTGCTTCAGGAAGCACGAGCTGCTCAAAAGAAGGTCAGCAGTCTATTGTATATTTTAGAAGAAAGTTTCGGAAGACAAGCATTGAACTATCACATTTATATGAAGGTGATTGGTTTTTGGCACTTCCATTGATAGAATCAGAGCAGTTTAAATTTGAGTTAAGCCTACTTGGGTTTTCATTCCTGTTAGACTCTATTAAAGTAGAAAATAATCATTGGTTTCATGCATTGATGCTCCTTCAGTATGGTACATTGATGACTATGTGGCCAATTGTTAGTTTAAAGATGCTATTCGTTGATAATGTGGTGGGGTTGAGGTTTCTCTTATTTGATGGTTGTCTTAGACAGGCTGTTGCTTTGGTTTTTCTTGTATTGACAATGCTCAATTCGACTGAAAAACTGTATGCTGCTTCACAGTTGCCTCTAACTTCTATCGAGCTCAAAATTTCTTGTATTCAAGGTATCAACAAGCACCTAGATTTCTTGTTCAGCAACTTTTCAGAAATAACGAATTCCAAGTGGATTCACCTAGACAATAGTCTTAAGAGATGTTGTTTGATGACCAAGCAGATTCCTTTGGCTGAATGTACTTATGATAATATTAAAGCACTTCAAAATGGGATGAATCACTTTTCTGTTACCCATGGTACCATGCAACTCTCTTTTGTCAAGGGCTTACAGGAGCAATATAAGCATGGGAATAGAATCACAGGTGCTATCAGTCACTCTTCTCTTTATTATGACAAAATGAACAAAAGCTTCCCTCCATTTTCTCTTTCTTTCACCGCTGCTCCAACTTTCTTTCTTGGTGTGCATGCGAAAAAGCTTATAGAACGTTGTATTACTTGTATTCAATTTGGAGAGCATGAATCAGTGAAGGATCTGGAAAATTCTGGCTTTTTGAATGACAGTTCAAGTTTCTGTGACTTCACCGACAAAGGTACTGCTATTACTCTTGAGAATAGTTTGAGAAACTCAAAGGAAGCTAACGGATGGTTATCTTGTCCCCTTCCAGAATTCGGAGCTCATCTCTTTGACATGGGTGATAGAAATTTAATCGAGGCATCTGATGGTTACCACAATGGCCACTTTAAAGATGCCAAATCTTCTGCCATGTCCGTAAATCCTGAAAACAATTGTGCTGATGTTATTGAACAGTCACTGCTGTGGCAAAACCAACACAAAGATTTGGATAAGAGGGCTCTAGAGCTAATGGATTCAGACAACAATGAGATGTTTGGTGTTGGTGATTGTTCTTTCTTAGAGGAACTCAACGTCAAGGTTCCAACATTTAACAAAGTTGACAAGCCCATTGATGAGGAGTTACGTGGTGCTAAACAAGCTATTGACTGGAATTGGAAGATGAATACTGGCACAATTCTCAGCCCTAATCCCACTGGTCCCAGGAGCACATGGCACCGAAATAAGAATATTTTATCGTCATCTGGACTTTTGTCACGTGGGCGGTCAGATGGGAAGACTGATCTCTTCAACAATGGTTTTGGCAATGGACCTAAGAAATCAAGAACTCAGTTCTCTTACACGCTACCTTTTGGTGGTGTAGATTATAGCATGAAGGCTAAAGTTAACCACCAGAAAGGGCTCCCTCACAAGCGAATTAGGAGAGCAAATGAGAAGAGATCAATAGATATTTCTAGAGGATGCCAGAGAAATTTGGAACTCTTATTAAGTGAAGCAAATCTGTTAATCACACTTGGTGATAGAGGTTGGAGGGAATGTGGAGCAAGAATAATGTTGGAGCGTCTTGATCACAACGAGTGGAAGCTTGTTGTCAAAATTTCTGGGATTACTAAGTATTCGTACAAAGCACATCAATTTTTGCAGCCTGGATCTACAAATCGCTATACTCATGCTATGATGTGGAAAGGAGGAAAGGATTGGACGCTAGAGTTTCCAGATAGAAGTCAATGGGCACTATTTAAGGAGATGCATGAGGAGTGTTACAATAGGAACGTTCGTGCTGCTTCAGTTAAGAATATTCCTATTCCTGGTGTGCACTTGATAGAGGAAAATGATGAAAACATTAAGGACAGTGCGTTTTTCCACATTTCTTCCAAATACTTTCGGCAGGTGGAAACTGATGTGGAGATGGCATTGAATCCATCCTCAATCTTATATGACATGGATAGTGAGGATGAGGACTGGATTATGATTGCTAAATCTTCATCTGAAGTTGACAGCAGTGGGATGGGAGAAATTTCAGATGATATGTTTGAAAAAACAATGGACATCTTTGAAAAGTCAGCATATACTCGGCAGAGTGATCAGTTCACAAAGGAAGAAATGGAGGAGCTGATGGCTGGAGGTGAGACTATCAATTTGATAATAATGATCTATGAGTATTGGCGGAAGAAAAGACAGAAAAAAGGCTTGCCTTTAATCCGACATCTTCAGTATGTATATTTTATATATCTATTCAAGTTATTTCTATTTCTCATAATTTTGCAGCCACCATTATGGGAAAGGTACCAACTGCAGTTGAAAGACTGGGAACTATCCATCACCAAAAACTGTACTGGCCTGCGCAATGGATTTCTGGAGAAGCCTTCATCAGCTGAGAAACCCCCCATGTTTGCATTCTGTTTAAAACCTCGAGGATTGGATGTCCCCAATAAAGGTTCAAAGCAGAGGTCTCATAGGAGGTTTTCTATGGGCAGCCACAGTAATGCTATCCCAGGAAACCATGATACTTTTAATGGTTTTGGTCGGAGACTAAATGGGTTTGGTTTGGCAGATGAAACGATTGCATACTCAGACTATAATCATGAAGTATTGGATGATTCTCCATTGATTCAAACATCGCCTAGGTTATTTTCCCTTCAAGATGTAGGGAGCATGGGATATACCTCAATGAGCTATAATGAGTTTGATAGAAATATTCCTCCAATTCGCAGGACCAGAGCCAAGAAATGTGGCCAGTTTCTATCTTGTAACGACCCAGAAACATTGACTTTGTACAATCAGAGAACAATTAATAAAAGAAACGGAGTTGATTGGCACAGGAATTTTCCTGCATGGAAAAGCCAGCGTCAATATCAAGTAGGCATCCACAGGCACTACATCCAGCAGTTGGATTCTTCTGATCTGGACGAGTTTAGGCTAGGGGATGCATCCGGTGCTGCTAAGGATGCTCATAACATTGCCAAGCACAAGCAAGAAAGGGCCAAACGATTGCTCCTCAGAGCAGATCTAGCAATTCACAAGGCTGTGGTAGCTCTCATGACGGCCGAAGCAATCAAGACATCATCATCAGGTAAGACAAACAGTGGTGCTGAATAG 4899 39.56 MENTVKNSHDKEFQKKSRSLDLKSLYRPNVTEVDEEKNVKRKISADDGDVQRVKKIRKRLSISSLRNGSSSKGRKSLDEVYDGALDRRGSSDISDLNQKSNRSSGIEKNRLGFDENDMQIPKRKRGLIGRKKLVADQVSKAVRQSDCKEDLVDHTVKLNGKCSVARNDSWKIKEKKCDDNLKENIKSTVNSTCHLKEEDGHGYEFDVENKDLPLKKSRRKSRKAKFVLEGSGEAEVSAGTSTKKCNYSQEDEEENLEENAARMLSSRFDPSCTGFTANSKPFANGLSVFVSNGHEIVSQHSKSSNGVEYESADGSGRILRPRKLGKDKKRRRKRRHFYEVFYKDSDAYWVLNRRIKVFWPLDQSWYFGRVNDYNKEINLHHVKYDDREEEWVDLQNERFKLLLLPTEVHGKDSRKKTMAADKIYDTRTEGMQYRKCKERKDLTIKDEGCGTYMDSEPIISWLARSSHRVKSSSSHVLKKQKTFDPGSKLSEKASNVHEYSNEHSLGSYKNHFLCKNDFLERVGSLAERERSGMSASGSTSCSKEGQQSIVYFRRKFRKTSIELSHLYEGDWFLALPLIESEQFKFELSLLGFSFLLDSIKVENNHWFHALMLLQYGTLMTMWPIVSLKMLFVDNVVGLRFLLFDGCLRQAVALVFLVLTMLNSTEKLYAASQLPLTSIELKISCIQGINKHLDFLFSNFSEITNSKWIHLDNSLKRCCLMTKQIPLAECTYDNIKALQNGMNHFSVTHGTMQLSFVKGLQEQYKHGNRITGAISHSSLYYDKMNKSFPPFSLSFTAAPTFFLGVHAKKLIERCITCIQFGEHESVKDLENSGFLNDSSSFCDFTDKGTAITLENSLRNSKEANGWLSCPLPEFGAHLFDMGDRNLIEASDGYHNGHFKDAKSSAMSVNPENNCADVIEQSLLWQNQHKDLDKRALELMDSDNNEMFGVGDCSFLEELNVKVPTFNKVDKPIDEELRGAKQAIDWNWKMNTGTILSPNPTGPRSTWHRNKNILSSSGLLSRGRSDGKTDLFNNGFGNGPKKSRTQFSYTLPFGGVDYSMKAKVNHQKGLPHKRIRRANEKRSIDISRGCQRNLELLLSEANLLITLGDRGWRECGARIMLERLDHNEWKLVVKISGITKYSYKAHQFLQPGSTNRYTHAMMWKGGKDWTLEFPDRSQWALFKEMHEECYNRNVRAASVKNIPIPGVHLIEENDENIKDSAFFHISSKYFRQVETDVEMALNPSSILYDMDSEDEDWIMIAKSSSEVDSSGMGEISDDMFEKTMDIFEKSAYTRQSDQFTKEEMEELMAGGETINLIIMIYEYWRKKRQKKGLPLIRHLQYVYFIYLFKLFLFLIILQPPLWERYQLQLKDWELSITKNCTGLRNGFLEKPSSAEKPPMFAFCLKPRGLDVPNKGSKQRSHRRFSMGSHSNAIPGNHDTFNGFGRRLNGFGLADETIAYSDYNHEVLDDSPLIQTSPRLFSLQDVGSMGYTSMSYNEFDRNIPPIRRTRAKKCGQFLSCNDPETLTLYNQRTINKRNGVDWHRNFPAWKSQRQYQVGIHRHYIQQLDSSDLDEFRLGDASGAAKDAHNIAKHKQERAKRLLLRADLAIHKAVVALMTAEAIKTSSSGKTNSGAE 1632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34486803 34501177 - Bda002759.1 Bda01g00721 721

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00721 1632 MobiDBLite consensus disorder prediction 1 56 - -
Bda01g00721 1632 PANTHER PHD FINGER PROTEINS 2 1627 - -
Bda01g00721 1632 MobiDBLite consensus disorder prediction 72 93 - -
Bda01g00721 1632 Pfam Enhancer of polycomb-like 1193 1287 IPR019542 -
Bda01g00721 1632 Gene3D - 351 398 - -
Bda01g00721 1632 PANTHER OS01G0179500 PROTEIN 2 1627 - -
Bda01g00721 1632 Coils Coil 1626 1632 - -
Bda01g00721 1632 MobiDBLite consensus disorder prediction 1 109 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00721 - - - zju:107421307 1488.4
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda01g00721 Bda03g00052 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00721 Bda-Chr1:34486803 Bda14g00039 Bda-Chr14:335954 1.26E-38 dispersed
Bda01g00721 Bda-Chr1:34486803 Bda03g00052 Bda-Chr3:635084 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g379 Blo01g01361 . Bda01g00721 Bda03g00052 . . Bma04g00052 Bma01g02149 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00336 . . . . . . Bpe04g00039 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cme04g00376
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004344 2 3 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 2 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda01g00721 Bda_Chr01 FPKM 0.0 0.185487 0.0 0.463765 0.0 0.0 0.0 0.0 0.0