Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00738 | ATGGAAGCGAATGCAGGAATGGTTGCTGGGTCCTACAAGAGAAATGAGATTGTTCGGATTCGTCACGATTCCGACGGCGGGCCAAAACCTTTGAAGCATTTGGACGGCCAAGTTTGTCAGATATGTGGTGACACTGTCGGACTCACAGCCTCGGGTGATGTATTTGTTGCGTGCAACGAATGTGCTTTCCCTGTTTGTCGGCCTTGTTATGAGTATGAGAGGAAAGATGGGAACCAGTCTTGCCCCCAGTGCAAGACTAGATACAAAAGGCACAAAGGAAGTCCGCGGGTGGATGGAGACGATGACGAGGATGATGTTGATGATATTGAAAACGAGTTCAATTATGCCCAAGGAAAGAGCAATGCAAGACGGAAGTGGCATGGAGAAGATGCTGATCTGTCATCATCGGCTAGGCACGAGTACCGTCAACCAATACCCCTTCTGACAAATGGGCAACCTATCTCTGGTGAAATTCCTGCTACACCAGACAACCAATCTGTTCGAACAAACTCAGGGCCCTTAGGTCCTTCTGAAAAAAATTCACTCAATTACATTGATCCACGACAGCCAGTTCCTGTGAGAATTGTGGATCCATCGAAAGACTTGAACTCTTATGGTCTTGGAAATGTTGACTGGAAGGAAAGAGTCGAAGGCTGGAAGCTCAAACAAGAGAAAAACCTGATGCAAGTGACAAGTAGATACCCTGAGGGGAAGGGGGATATTGAAGGTACAGGCTCTAATGGGGAAGAACTGCAAATGGCTGATGATGGTAGACAACCTTTGAGTCGCGTGGTTCCCATTTCTTCTTCTCACTTGACCCCGTACCGAGTCGTGATCATACTCCGGCTTATTATTTTGGGATTCTTCTTACAGTACCGAGTGTCACACCCTGTGAAGGACGCATATGCATTGTGGCTGACATCAGTTATCTGTGAGATTTGGTTTGCGTTATCATGGCTATTGGATCAGTTTCCTAAGTGGTCTCCCATTAATCGCGAGACCTATCTTGACAGGCTCACATTGAGATATGATCGTGACGGAGAACCATCACAGCTTGCTCCTATAGATGTTTTTGTTAGTACAGTGGATCCTCTTAAAGAGCCTCCACTCATTACAGCAAACACTGTTCTTTCCATACTTGCGGTGGATTACCCTGTTGACAAAGTCTCTTGCTATGTCTCTGACGATGGTTCAGCAATGCTGACCTTCGAGGCACTCTCTGAAACTGCAGAATTTGCAAGAAAGTGGGTGCCCTTCTGCAAGAAGCATAACATCGAGCCAAGGGCTCCTGAATTTTATTTTGCTCAGAAAATAGACTACTTAAAGGATAAGATACAGCCCTCATTTGTGAAAGAGCGACGAGCCATGAAGAGAGAGTATGAAGAATTCAAGGTTAGGGTAAACGCACTGGTCGCCAAGGCTCAGAAGATGCCCGAAGAAGGCTGGACGATGCAGGATGGTACACCATGGCCTGGAAATAATCCTAGGGATCATCCAGGAATGATCCAGGTTTTTCTAGGACATAGTGGAGGACTAGACACAGATGGAAATGAGCTTCCTAGACTTGTTTATGTTTCTCGAGAAAAAAGACCAGGCTTCCAACATCATAAGAAAGCTGGAGCCATGAATGCATTGATTCGAGTTTCAGCTGTCCTTACCAATGGAGCATACCTCCTGAATGTTGATTGTGACCACTATTTTAACAACAGCAAAGCTCTCAAGGAAGCTATGTGTTTTATGATGGATCCTGCTTTTGGAAAGAAGACTTGCTACATACAATTTCCGCAGCGATTTGACGGCATCGATTTGCACGATCGATACGCCAATCGTAATATTGTTTTCTTTGATATCAACTTGAAGGGCCTGGATGGCATCCAGGGTCCTGTTTATGTGGGAACTGGTTGTTGCTTCAATAGGCAAGCTTTATATGGGTATGATCCAGTTTTGACCGAGAAAGATTTGGAACCTAATATTATTGTTAAGAGTTGTTGTGGTCCAAGAAAGAAGGGTAAAAGTGGAAATAAGAAGTATATCGACAAAAAGAGGGCGATGAAAAGAACTGAATCTACCATACCAATCTTCAAGATGGAAGACATTGAGGACGGTGTCGAAGCTGGATATGATGATGAGAGATCACTCCTCATGTCTCAGAAGAGCTTGGAGAAGCGTTTCGGCCAGTCTCCAGTTTTTATTGCAGCAACTTTCATGGAACAGGGAGGAATTCCACCTTCAACCAATCCTGCTACTCTTCTAAAGGAAGCCATCCATGTTATTAGCTGTGGATATGAAGACAAGACAGATTGGGGCAAAGAGATTGGATGGATCTATGGCTCTGTTACGGAAGATATTTTAACTGGATTCAAGATGCATGCCCGTGGTTGGATATCAATCTATTGCATGCCTCTTCGGCCAGCATTTAAGGGGTCTGCTCCCATCAATCTTTCTGATCGGTTGAACCAGGTGCTTCGATGGGCTCTGGGTTCAATTGAGATTTTACTGAGCAGACATTGTCCCATCTGGTATGGTTACAACGGGAGACTAAAGCTTTTGGAGAGAATAGCATACATCAATACTATTGTCTACCCACTCACTTCAATCCCTCTGTTAGCTTATTGTATTCTACCTGCATTCTGTCTTCTTACTGGAAAATTCATCATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTCATCCTTCTCTTTGTATCCATCTTTGCCACCGGTATCCTTGAACTTAGATGGAGTGGAGTCAGCATTGAAGACTGGTGGAGGAATGAGCAGTTCTGGGTCATTGGGGGTACTTCAGCTCATTTGTTTGCTGTCTTCCAAGGGCTCTTGAAAGTGCTTGCTGGAATTGATACCAACTTCACTGTCACTTCAAAGGCATCTGATGAGGATGGTGAATTCTCCGAACTCTATGAGTTCAAATGGACATCTCTCCTCATCCCTCCCACCACTGTAATTATTGTGAATATGGTAGGTATTGTGGCTGGTGTTTCCTATGCCATTAACAGCGGGTACCAGTCATGGGGTCCGCTCTTTGGCAAGCTCTTCTTCGCATTATGGGTCATCGTCCATTTGTACCCGTTCCTCAAAGGTTTGCTGGGTAGGCAAAACCGTACCCCTACGATTGTCATTGTGTGGTCCATTCTCCTTGCTTCTATATTCTCCTTACTCTGGGTGCGGATCGACCCATTCACATCTGATGCTGCCAAAGCTGCAGCAAGAGGTCAATGCGGTATCAATTGCTAG | 3252 | 45.02 | MEANAGMVAGSYKRNEIVRIRHDSDGGPKPLKHLDGQVCQICGDTVGLTASGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYAQGKSNARRKWHGEDADLSSSARHEYRQPIPLLTNGQPISGEIPATPDNQSVRTNSGPLGPSEKNSLNYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQEKNLMQVTSRYPEGKGDIEGTGSNGEELQMADDGRQPLSRVVPISSSHLTPYRVVIILRLIILGFFLQYRVSHPVKDAYALWLTSVICEIWFALSWLLDQFPKWSPINRETYLDRLTLRYDRDGEPSQLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRVNALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPAFGKKTCYIQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEKDLEPNIIVKSCCGPRKKGKSGNKKYIDKKRAMKRTESTIPIFKMEDIEDGVEAGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPLRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPLTSIPLLAYCILPAFCLLTGKFIIPEISNFASMWFILLFVSIFATGILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGEFSELYEFKWTSLLIPPTTVIIVNMVGIVAGVSYAINSGYQSWGPLFGKLFFALWVIVHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSDAAKAAARGQCGINC | 1083 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 34669730 | 34675930 | + | Bda002777.1 | Bda01g00738 | 738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00738 | 1083 | ProSiteProfiles | Zinc finger RING-type profile. | 39 | 85 | IPR001841 | - | |
Bda01g00738 | 1083 | PANTHER | CELLULOSE SYNTHASE | 19 | 1083 | - | - | |
Bda01g00738 | 1083 | MobiDBLite | consensus disorder prediction | 122 | 137 | - | - | |
Bda01g00738 | 1083 | MobiDBLite | consensus disorder prediction | 234 | 253 | - | - | |
Bda01g00738 | 1083 | CDD | mRING-HC-C4C4_CesA_plant | 37 | 87 | - | - | |
Bda01g00738 | 1083 | SUPERFAMILY | RING/U-box | 22 | 111 | - | - | |
Bda01g00738 | 1083 | Pfam | Cellulose synthase | 355 | 1073 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Bda01g00738 | 1083 | MobiDBLite | consensus disorder prediction | 148 | 184 | - | - | |
Bda01g00738 | 1083 | Pfam | Zinc-binding RING-finger | 29 | 106 | IPR027934 | - | |
Bda01g00738 | 1083 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 19 | 1083 | - | - | |
Bda01g00738 | 1083 | Coils | Coil | 453 | 473 | - | - | |
Bda01g00738 | 1083 | MobiDBLite | consensus disorder prediction | 119 | 138 | - | - | |
Bda01g00738 | 1083 | MobiDBLite | consensus disorder prediction | 148 | 185 | - | - | |
Bda01g00738 | 1083 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 112 | IPR013083 | - | |
Bda01g00738 | 1083 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 513 | 650 | IPR029044 | - | |
Bda01g00738 | 1083 | MobiDBLite | consensus disorder prediction | 75 | 107 | - | - | |
Bda01g00738 | 1083 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 369 | 899 | IPR029044 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00738 | Bda-Chr1:34669730 | Bda03g00590 | Bda-Chr3:4901375 | 0 | dispersed | |
Bda14g01067 | Bda-Chr14:9244160 | Bda01g00738 | Bda-Chr1:34669730 | 7.44E-16 | dispersed | |
Bda10g00721 | Bda-Chr10:41633154 | Bda01g00738 | Bda-Chr1:34669730 | 0 | transposed | |
Bda11g00039 | Bda-Chr11:481523 | Bda01g00738 | Bda-Chr1:34669730 | 0 | transposed | |
Bda11g00870 | Bda-Chr11:8572037 | Bda01g00738 | Bda-Chr1:34669730 | 0 | transposed | |
Bda11g00940 | Bda-Chr11:9195821 | Bda01g00738 | Bda-Chr1:34669730 | 0 | transposed | |
Bda01g00738 | Bda-Chr1:34669730 | Bda03g00065 | Bda-Chr3:718275 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00738 | K10999 | - | vvi:100254408 | 2098.55 |