Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00755 ATGGCCTACCACAACCATCTCTCGCAAGACCTTCCTCTCCACCGCTTCACGGACCAATCCCAGCAACAGCAGAACGCGCCATTATCGGAAAATTCGCTACGGACTATTTTGCCTGATCAGTTGACCGCCCACGCTTCGCCGGACCCGACCTCTAAGAATCACCACCACCATCATCACCCGCTTCAGACGGCGCCTAATTGGCTGAACAACGCACTCCTCCGCACCCAAAACCCTCACTCCCACTTCTCTACCGACACCACAACTACCACTACCAACAACGCCAATACCAATTTCCTCAACCTCCATTCCACTGCGTCCGATTCCCCCGCTTCTCACTCCTCCAACCAGTGGCTCTCCCGCCCTATCCTCCACCGAAACCACAGCGACGTCATCGACGATGTGACCGCCGGAGACGCCTTGATAGGGGCCTCTACCGGAACGCTATCGCACGAATCGGCTGAGTTGAAGAACAATGCAAACAGCGGGGAAGCTTTGAACAAAGGCGATGGTGTGGGGGTGGAAGCAGGCGGCGACGGAAGTGGTGGAGAAGGGATTGTGAATTGGCAGAATGCGAGGTATAAGGCTGAGATTCTGGGTCATCCACTTTACGAGCAGCTTCTTTCAGCCCATGTCGCCTGTCTTCGAATCGCAACTCCCGTCGATCAGTTGCCGAGGATCGATGCACAGCTCGCACAGTCTCAGAACGTAGTGACAAAATACTCGGCCTTGAGCCATGGTGCTCAGTCAATGGTTGGGGACGAGAAAGAGCTTGATCAGTTCATGACTCATTATGTTCTACTGCTTTGTTCCTTCAAAGATCAACTCCAACAACATGTTCGCGTCCATGCAATGGAAGCAGTGATGGCTTGTTGGGACATCGAGCAATCCCTTCAAAGCTTAACCGGAATGGGGAAAGGAGCAATTAGTGGCCCTGGAAACGAGAATCGTGATGCTTATTTGCAGTTATCAGTGAGGGTTCTAGCTGTTTTTTGCCGCGTTTATGAGATTGCTTCATCTAAAGAAATGGTCTCTAAGATTCCGTTAATTCTGGAAAGCCTATCCAACGAATCTTGCTTTGCAGTTCTCGAGGATTGCTTTGAATTTTTATACTTAGTATCGACTGCTTCAGAGGATGCAGTCATGACATTGTTCAACAATGGGGGTCTGAAAATGTTGGCATTGCAAATGTCAAAAATGACAGATGGTTCTCATCCAACAAAGCTAGCCATCCAACTTGTTCAAATGATTATAAGAAAGCTGCCTATTGATGTTGTCATTGCTAACTTTCTCTCGGAGCTTTCAACGATCGTGTCCATAACTGCAAGGCAGTTTGCTATCTTGCATGATAGTACGAAATTTGAAGCACTTCATCTACTTTCTGTGGTTTTTTCATCAAATTCAACACGACTTTATGATGCCCTTTGCATAATGCCTGCAAATAATTGGTCAAAGCATATGCATGATGGGATTATGGCTGTTCTTCACAATCGAGTTGCTCCTGCTGATAGGTTTCATGCACTTATTTTGGCGGAGTCTATGACCTCCATACTGGGGGAAAGCTGGCTGATTGTTGAGAAGCACTCACTAGACACGTCAGATCCTCCAGCTGACAGGTGTCTATTACTTGTCCTAGAGCAATCAAGAGTTGAAGTTGCCGTTCTTCTCAATGAGCTGGCATATTTGAAATACGAAGCATCCAAGAACTCATCGTCCTCTATGGAGATAATTCGTTTAAAACAACAAAATGTGGCTGTTGCCTTTTCTTTGGTGGAGAAACTAATCAAGTTAATATCAAATGCTGATGAAAATCTGGGAAGGCTTATTGATGAAAACACTTGCACAAAGGTGATTATGGGGCTTAATGAGACAATTGGTGTAGTTCTAGAATACTTACGAGATGCGAAGGAACATGGAGAAAGGAAAGGAGATGATCTTCTTGCCTCAGTACGAGTTATTGGGAGCTATCTTGCTGAAACGCCAGTTGCATGTGAAGAGAAGGTTAGAGAACTCTTAGGATATATGCTCTCTGTCGAAGGTGAAGATGAACAGAGCCCTTTCTACTCAGTATGCTTTTTGCTTCCAATGCTATGTCAAATAACGATGAAGGTTGAAGGATGTAAAGCTTTGGCTATTTCTGGAGGATATAAATCTGTTATTGATTGCCTTATAAGATTGATTGGACCAAATGCTGGTGGCATTGAAGATAATGGCTGTGTCTTCTTGGCTTGCGACACAATAATGAATTTTCTTTTGAAGGAGCAAGTTCAGTTTCCTTTTGACAAATCAGCTTTCGTCCGTCTTTTGAAAGCATTGGCATCTTGGACAGAGAATACTGACGATCCATCAGTTGTTATGATGGCTGCGAGTCTCTGCACGTTGATATGTGATTACACATCTGAGGATGCTCTTGTTCGTGATCCGGACTTCGGTCGAAAAAACCTTGATAAGATATCTGGGCTTTTTTCAAGAAGTTTGTCTTCAGTTGGGCAGGTAAAGCCTCATGATTTTTTGGGTACCTCGTCATTGATGCTAAACATTTAG 2541 45.26 MAYHNHLSQDLPLHRFTDQSQQQQNAPLSENSLRTILPDQLTAHASPDPTSKNHHHHHHPLQTAPNWLNNALLRTQNPHSHFSTDTTTTTTNNANTNFLNLHSTASDSPASHSSNQWLSRPILHRNHSDVIDDVTAGDALIGASTGTLSHESAELKNNANSGEALNKGDGVGVEAGGDGSGGEGIVNWQNARYKAEILGHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVTKYSALSHGAQSMVGDEKELDQFMTHYVLLLCSFKDQLQQHVRVHAMEAVMACWDIEQSLQSLTGMGKGAISGPGNENRDAYLQLSVRVLAVFCRVYEIASSKEMVSKIPLILESLSNESCFAVLEDCFEFLYLVSTASEDAVMTLFNNGGLKMLALQMSKMTDGSHPTKLAIQLVQMIIRKLPIDVVIANFLSELSTIVSITARQFAILHDSTKFEALHLLSVVFSSNSTRLYDALCIMPANNWSKHMHDGIMAVLHNRVAPADRFHALILAESMTSILGESWLIVEKHSLDTSDPPADRCLLLVLEQSRVEVAVLLNELAYLKYEASKNSSSSMEIIRLKQQNVAVAFSLVEKLIKLISNADENLGRLIDENTCTKVIMGLNETIGVVLEYLRDAKEHGERKGDDLLASVRVIGSYLAETPVACEEKVRELLGYMLSVEGEDEQSPFYSVCFLLPMLCQITMKVEGCKALAISGGYKSVIDCLIRLIGPNAGGIEDNGCVFLACDTIMNFLLKEQVQFPFDKSAFVRLLKALASWTENTDDPSVVMMAASLCTLICDYTSEDALVRDPDFGRKNLDKISGLFSRSLSSVGQVKPHDFLGTSSLMLNI 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34791738 34803087 - Bda002795.2 Bda01g00755 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00755 846 Coils Coil 590 610 - -
Bda01g00755 846 MobiDBLite consensus disorder prediction 42 63 - -
Bda01g00755 846 Pfam KNOX1 domain 193 234 IPR005540 GO:0003677|GO:0005634
Bda01g00755 846 Pfam KNOX2 domain 251 301 IPR005541 GO:0003677|GO:0005634
Bda01g00755 846 SMART KNOX2_2 247 302 IPR005541 GO:0003677|GO:0005634
Bda01g00755 846 SMART KNOX1_2 191 235 IPR005540 GO:0003677|GO:0005634
Bda01g00755 846 Pfam Neurochondrin 310 793 IPR008709 -
Bda01g00755 846 PANTHER NEUROCHONDRIN 311 834 IPR008709 -
Bda01g00755 846 MobiDBLite consensus disorder prediction 77 115 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00755 Bda-Chr1:34791738 Bda09g00064 Bda-Chr9:1265540 2.15E-41 dispersed
Bda01g00755 Bda-Chr1:34791738 Bda03g00080 Bda-Chr3:823750 6.70E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00755 - - tcc:18587742 671.389