Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00764 ATGATGGAGCAGATTATCAGAGAGATTTCTGTTATGCGACTGGTTCGTCATCCTAATATCGTCGAGCTCAAGGAGGTAATGGCTACCAAGGGTAAGATCTTTGTTATCATGGAATACGTCCGCGGAGGCGAGCTTTTTGCCAAGGTCGCGAAAGGAAAGCTTAAAGAAGATCAAGCGCGGAAATACTTTCAGCAATTGATTAGCGCCGTCGATTTCTGCCATAGCAGGGGAGTCTCTCACCGTGATTTGAAGCCGGAGAATCTGCTGTTGGATGAGAACGAGGACTTGAAGATTTCTGATTTTGGCCTTTCTGCTCTGCCGGAACATCTACGGAACGACGGTCTTCTTCACACGCAGTGCGGTACTCCGGCGTATGTGGCCCCGGAGGTTCTGAGAAGAAAAGGCTACGCCGGCGGAAAAGCCGATTTATGGTCCTGCGGTGTTATTCTCTACGTGCTTCTTGCAGGTTTTCTTCCGTTTCAAGATGAGAACGTTATGAACATGTACAAGAAGGTTTTCAAGGGTGAATTTGAATGTCCGCCGTGGTTTTCGAGCGAATCGAAGCGGTTAGTCTCCAAACTCCTCGTCGTTGATCCTGAAAAACGGATAACAATTCCGGCGATTATGCGCGTTCCGTGGTTTCGCAGAGGATTATCGAAGCCGCAGGCCTTTTCGGCGTTTTCGCCAATAGAAATTCCGGACAACAAACCTGAGGAGATACTCGACGGCGATATCACTAAAATACCGACTCCGAAGTTTTTCAATGCCTTCGAGTTGGTCTCTTCAATGTCATCTGGATTCGATTTGTCGAATCTGTTCGAGAACGAGAAGAAGGCAGGGTCAATGTTCACGTCGAGGTGCCCGGCGGCAGCGATCATGACGAAGATCGAGGCGGTGGCGAAGGGGCTGAGCTTCAAAGTCTCCACCGTGAAGGATTTCAAGCTGAGATTACAGGGGCCATCGGAAGGAAGAAAAGGAAAGCTTTCGGTGACGGCAGAAGTATTCGAATCTGCGCCGGAGGTAACCATCGTAGAATTCAACAAGTCTTCCGGCGACACCTTCGAATACGCAAAGTTCTGCGAAGAAGACATTCGACCGGCACTGAAAGACGTAGTCTGGACATGGCAAGGCGACTGCGTCTCTAACAGTAAAGTAGAACAGTGA 1164 49.23 MMEQIIREISVMRLVRHPNIVELKEVMATKGKIFVIMEYVRGGELFAKVAKGKLKEDQARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKISDFGLSALPEHLRNDGLLHTQCGTPAYVAPEVLRRKGYAGGKADLWSCGVILYVLLAGFLPFQDENVMNMYKKVFKGEFECPPWFSSESKRLVSKLLVVDPEKRITIPAIMRVPWFRRGLSKPQAFSAFSPIEIPDNKPEEILDGDITKIPTPKFFNAFELVSSMSSGFDLSNLFENEKKAGSMFTSRCPAAAIMTKIEAVAKGLSFKVSTVKDFKLRLQGPSEGRKGKLSVTAEVFESAPEVTIVEFNKSSGDTFEYAKFCEEDIRPALKDVVWTWQGDCVSNSKVEQ 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34939579 34940742 - Bda002810.1 Bda01g00764 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00764 387 CDD CIPK_C 255 369 - -
Bda01g00764 387 Pfam Protein kinase domain 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00764 387 PANTHER - 1 384 - -
Bda01g00764 387 ProSiteProfiles NAF domain profile. 249 274 IPR018451 GO:0007165
Bda01g00764 387 SMART serkin_6 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00764 387 Pfam NAF domain 251 307 IPR004041 GO:0007165
Bda01g00764 387 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 384 - -
Bda01g00764 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Bda01g00764 387 Gene3D Kinase associated domain 1, KA1 250 374 - -
Bda01g00764 387 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00764 387 SUPERFAMILY Protein kinase-like (PK-like) 2 237 IPR011009 -
Bda01g00764 387 Gene3D Transferase(Phosphotransferase) domain 1 1 249 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00764 Bda-Chr1:34939579 Bda14g01118 Bda-Chr14:10175510 3.44E-154 dispersed
Bda01g00764 Bda-Chr1:34939579 Bda03g00094 Bda-Chr3:895942 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69426 PF00069 Pkinase 4.40E-63 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00764 - - csv:101213773 608.986