Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00815 ATGGCTGCCTCAACCATGGCTCTTTCCTCTCCCTCTTTGGCCGGTAAGGCAGTCAAGCTCTCTCCCTCCGCCCCGGAGGTTGTCGGAAACGGCAGAATCAGCATGAGGAAGACCGGCAGCAAACCCACTAGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGTGAGGCTCCCTCCTATCTGACCGGTGAATACCCTGGAGATTACGGATGGGACACTGCTGGACTCTCCGCTGACCCCGAAACCTTCTCAAAGAACCGGGAGCTAGAGGTCATCCATTCTCGATGGGCCATGCTCGGAGCCCTCGGCTGCGTCTTCCCAGAGCTGCTATCCAGAAACGGCGTGAAATTTGGAGAGGCCATATGGTTCAAGGCCGGATCTCAGATTTTCAGCGAGGGAGGACTAGACTATTTGGGCAACCCGAGCTTGGTCCACGCACAGAGCATCTTAGCCATCTGGGCTTTTCAGGTCATCTTAATGGGGGCAGTCGAAGGCTACCGTGTAGCCGGAGGGCCGCTCGGAGAAGTCACCGACCCAATCTACCCTGGCGGGTCTTTTGACCCGTTAGGTCTGGCAGACGACCCAGAAGCATTTGCAGAGCTGAAGGTGAAAGAGTTAAAGAACGGAAGGCTAGCCATGTTTTCAATGTTCGGATTCTTCGTTCAGGCCATCGTCACCGGAAAGGGACCTTTGGAGAATTTGGCCGACCACCTCGCAGACCCAGTCAACAACAACGCCTGGGCTTATGCCACCAACTTTGTTCCCGGAAAGTGA 792 56.19 MAASTMALSSPSLAGKAVKLSPSAPEVVGNGRISMRKTGSKPTSSPWYGPDRVKYLGPFSGEAPSYLTGEYPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAIWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWAFQVILMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 38644168 38644959 + Bda002914.1 Bda01g00815 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00815 263 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Bda01g00815 263 Gene3D Chlorophyll a/b binding protein domain 54 256 - -
Bda01g00815 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 263 IPR001344 GO:0009765|GO:0016020
Bda01g00815 263 SUPERFAMILY Chlorophyll a-b binding protein 46 260 - -
Bda01g00815 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 263 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00815 Bda-Chr1:38644168 Bda07g00941 Bda-Chr7:10963433 0 dispersed
Bda15g00911 Bda-Chr15:15172748 Bda01g00815 Bda-Chr1:38644168 1.97E-146 dispersed
Bda11g00909 Bda-Chr11:8906510 Bda01g00815 Bda-Chr1:38644168 2.91E-66 transposed
Bda01g00815 Bda-Chr1:38644168 Bda07g00939 Bda-Chr7:10931663 4.82E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00815 K08912 - cpap:110819729 513.072