Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00835 ATGGAGTCGAAGACTTCGGTTAGGTTTCCGCTTGGGCGGCAGTCATCTTTAGCGCCGGACAGGCACTTAGGAGAATTGGTTGATCTGGAAGATGCGGAAATGATCGATCCTGGCGTAAAGCTGATGTATTTGGCTAATGAAGGTGATTTGGAAGGAATCGCGGAGCTTTTGGGTTCAGGAATCGACGTCAATTTCCGTGATATTGATGGCCGCACGGCTCTCCATATTTCTGCATGCCAGGGGTATTCTGACGTTGTTGATTTGTTGCTTCAAAGAGGAGCTGAGGTTGACCCTAAAGATCGCTGGGGAAGCACGCCTCTTGCAGATGCTATTCACTACAAAAACCATAATGTGATTAAGTTGTTGGAGAAACATGGTGCAAAACCCCTGATGGCCCCAATGCATGTAAAACATGCTCGCGAAGTACCAGAATATGAAATTGATCCAAAAGAGCTTGATTTTACAAACAGTGTTGACATAACGAAGGGAACTTTCCGTATGGCATCATGGCGTGGGATAGACGTTGCCGTAAAAAAGTTTGCGGAGGATGTGATCGCTGAGGAGGATGAAGTGAGGGCATTTCGTGATGAGCTTGCACTTCTTCAGAAGTTAAGACATCCAAATGTTGTGCAATTTCTAGGTGCAGTGACTCAGAGCAGTCCAATGATGATTGTTACGGAATATTTACCAAAGGGAGATCTTTTTGAATTCTTGAAAAAGAAAGGAGCATTAAAACCAATAGTTGCTGTTAGATTTGCCCTTGATATTGCAAGGGGTATGAGTTATTTGCATGAGAATAAGCCTGCACCAATAATTCACTGTGATCTTGAGCCTTCAAATATATTACGGGATGACTCCGGGCAGTTGAAAGTTGCAGATTTTGGGGTTAGCAAGTTGTTGACAGTTAAAGAAAATAAGCCTCTATCATGCCAAGTCACTTCCTGCCGATATGTGGCTCCTGAGGTTTTCCAAAATGAAGGGTATGATACAAAGATGACTGAAGGCTGCCCTCCGTTTTCTGCAAAGAAAGAAAATGAAGTTCCTAAAGCATATGCTGCAAGACAACGTCCACCTTTTAAAGCCCCATCAAAACATTACGCTCATGGACTTAGAGAGTTAATTGAAGAGTGCTGGCACGAGAAGCCAGCCAAAAGACCAACTTTTAGGGAGATTATAAGAAGGCTGGAATCCATCTCTAACAATCTTGGTCACAAAAGGAGTTGGAAGGTTCCTCTCTCTCTCACATACTCTATTTGTGCATGTGCTCAGGCACCTAAAACCATGTTTTGCATTGTTTATTTATTTAATATCACTCACTCTCTATTGGATCTACTTTCAAATATGCAATATAATAGAGTTACACAATATCTTTGGATTGAATTACAACTGTTCATCTGCTCAAGATGTTAG 1410 42.2 MESKTSVRFPLGRQSSLAPDRHLGELVDLEDAEMIDPGVKLMYLANEGDLEGIAELLGSGIDVNFRDIDGRTALHISACQGYSDVVDLLLQRGAEVDPKDRWGSTPLADAIHYKNHNVIKLLEKHGAKPLMAPMHVKHAREVPEYEIDPKELDFTNSVDITKGTFRMASWRGIDVAVKKFAEDVIAEEDEVRAFRDELALLQKLRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLFEFLKKKGALKPIVAVRFALDIARGMSYLHENKPAPIIHCDLEPSNILRDDSGQLKVADFGVSKLLTVKENKPLSCQVTSCRYVAPEVFQNEGYDTKMTEGCPPFSAKKENEVPKAYAARQRPPFKAPSKHYAHGLRELIEECWHEKPAKRPTFREIIRRLESISNNLGHKRSWKVPLSLTYSICACAQAPKTMFCIVYLFNITHSLLDLLSNMQYNRVTQYLWIELQLFICSRC 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 39892730 39896452 - Bda002950.2 Bda01g00835 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00835 469 ProSiteProfiles Protein kinase domain profile. 119 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00835 469 PIRSF ILK 1 416 - -
Bda01g00835 469 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Bda01g00835 469 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 419 - -
Bda01g00835 469 SUPERFAMILY Protein kinase-like (PK-like) 164 397 IPR011009 -
Bda01g00835 469 Gene3D Phosphorylase Kinase; domain 1 146 229 - -
Bda01g00835 469 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 419 - -
Bda01g00835 469 Pfam Protein tyrosine and serine/threonine kinase 160 395 IPR001245 GO:0004672|GO:0006468
Bda01g00835 469 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Bda01g00835 469 Gene3D Transferase(Phosphotransferase) domain 1 230 411 - -
Bda01g00835 469 SUPERFAMILY Ankyrin repeat 40 130 IPR036770 -
Bda01g00835 469 SMART ANK_2a 69 98 IPR002110 GO:0005515
Bda01g00835 469 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bda01g00835 469 Pfam Ankyrin repeats (3 copies) 41 129 IPR002110 GO:0005515
Bda01g00835 469 Gene3D - 25 144 IPR036770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00835 Bda-Chr1:39892730 Bda15g00444 Bda-Chr15:7493005 1.11E-118 dispersed
Bda01g01977 Bda-Chr1:56157626 Bda01g00835 Bda-Chr1:39892730 1.53E-07 transposed
Bda01g00835 Bda-Chr1:39892730 Bda07g00956 Bda-Chr7:11072390 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69427 PF07714 PK_Tyr_Ser-Thr 2.70E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00835 - - tcc:18596602 656.366