Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00875 ATGATGGGAGTCAGTGCTGTAAAACAAGACAGCAAAGCCATGATTCTGACTGGTTTCGCTGGTTTAGTAGCCGGAGCCTGTAGCATGGCGATAGGAGAGTTTGTATCTGTTTATTCACAGTTGGATGTAGAGTTAGCTCAAATGAAGAGAGAGAAACAAAAGTGGGAGGTGAGAGAAAAGAATGGAGACAAAGAAGAAGAAGAAGAGAGAAAAGAAGAAAGTCTGCCAAACCCTTTAGAGGCAGCTGGAGCCTCAGCTTTGGCCTTCTCAGTTGGAGCCATTGTTCCTTTATTAGCTGCTTCGTTTATCAGTGGGTATATGGTGAGACTGGGAGTGGTTGCAGCCGCAGTGACGATGGCTTTGATAGTTTTTGGATGGGCAGGGGCTGTGCTTGGAAAGGCTCCGCCGGTTAAGTCTGCTTCTAGGGTTTTGGTTGGAGGGTGGCTAGCCATGGCTATAACTTTTGGACTCATCAAGTTGGTTGCTTCAAATGGCCTCTCATAG 504 46.83 MMGVSAVKQDSKAMILTGFAGLVAGACSMAIGEFVSVYSQLDVELAQMKREKQKWEVREKNGDKEEEEERKEESLPNPLEAAGASALAFSVGAIVPLLAASFISGYMVRLGVVAAAVTMALIVFGWAGAVLGKAPPVKSASRVLVGGWLAMAITFGLIKLVASNGLS 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 41658407 41658910 - Bda003012.1 Bda01g00875 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00875 167 MobiDBLite consensus disorder prediction 54 77 - -
Bda01g00875 167 Pfam VIT family 69 157 IPR008217 GO:0005384|GO:0030026
Bda01g00875 167 Pfam VIT family 1 63 IPR008217 GO:0005384|GO:0030026
Bda01g00875 167 Coils Coil 38 70 - -
Bda01g00875 167 MobiDBLite consensus disorder prediction 54 76 - -
Bda01g00875 167 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 1 163 - -
Bda01g00875 167 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 163 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00875 Bda-Chr1:41658407 Bda03g00386 Bda-Chr3:3203427 6.42E-67 dispersed
Bda01g00875 Bda-Chr1:41658407 Bda13g01411 Bda-Chr13:36819054 2.20E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00875 K22736 - pop:7466401 235.728