Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00875 | ATGATGGGAGTCAGTGCTGTAAAACAAGACAGCAAAGCCATGATTCTGACTGGTTTCGCTGGTTTAGTAGCCGGAGCCTGTAGCATGGCGATAGGAGAGTTTGTATCTGTTTATTCACAGTTGGATGTAGAGTTAGCTCAAATGAAGAGAGAGAAACAAAAGTGGGAGGTGAGAGAAAAGAATGGAGACAAAGAAGAAGAAGAAGAGAGAAAAGAAGAAAGTCTGCCAAACCCTTTAGAGGCAGCTGGAGCCTCAGCTTTGGCCTTCTCAGTTGGAGCCATTGTTCCTTTATTAGCTGCTTCGTTTATCAGTGGGTATATGGTGAGACTGGGAGTGGTTGCAGCCGCAGTGACGATGGCTTTGATAGTTTTTGGATGGGCAGGGGCTGTGCTTGGAAAGGCTCCGCCGGTTAAGTCTGCTTCTAGGGTTTTGGTTGGAGGGTGGCTAGCCATGGCTATAACTTTTGGACTCATCAAGTTGGTTGCTTCAAATGGCCTCTCATAG | 504 | 46.83 | MMGVSAVKQDSKAMILTGFAGLVAGACSMAIGEFVSVYSQLDVELAQMKREKQKWEVREKNGDKEEEEERKEESLPNPLEAAGASALAFSVGAIVPLLAASFISGYMVRLGVVAAAVTMALIVFGWAGAVLGKAPPVKSASRVLVGGWLAMAITFGLIKLVASNGLS | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 41658407 | 41658910 | - | Bda003012.1 | Bda01g00875 | 875 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00875 | 167 | MobiDBLite | consensus disorder prediction | 54 | 77 | - | - | |
Bda01g00875 | 167 | Pfam | VIT family | 69 | 157 | IPR008217 | GO:0005384|GO:0030026 | |
Bda01g00875 | 167 | Pfam | VIT family | 1 | 63 | IPR008217 | GO:0005384|GO:0030026 | |
Bda01g00875 | 167 | Coils | Coil | 38 | 70 | - | - | |
Bda01g00875 | 167 | MobiDBLite | consensus disorder prediction | 54 | 76 | - | - | |
Bda01g00875 | 167 | PANTHER | VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 | 1 | 163 | - | - | |
Bda01g00875 | 167 | PANTHER | FE(2+)/MN(2+) TRANSPORTER PCL1 | 1 | 163 | IPR008217 | GO:0005384|GO:0030026 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00875 | Bda-Chr1:41658407 | Bda03g00386 | Bda-Chr3:3203427 | 6.42E-67 | dispersed | |
Bda01g00875 | Bda-Chr1:41658407 | Bda13g01411 | Bda-Chr13:36819054 | 2.20E-73 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00875 | K22736 | - | pop:7466401 | 235.728 |