Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00876 | ATGGATATGGACACTAATTTCACTGTCGGCAAGCCGCCGGCGACGGCCGGTGTCATGGATTTGAAGCAGATGCCTGACACCCCGCATCGTGGATCTCACCACCGACGGGCACTGTCCGACACCTCTTTCCGATTACCGAATCTGGACGATCTTATCTTTGATCCCTCCGATCTTGACCTTTCTTATCTTCCATCGCCTTCACCGTCTCCTTCATCTGGCGCTTCCATCTCTAAGTTCGATGATTCCAGCGGCCCCAAGCTCTTGCCCTCTGGCTCCGGCGCCGTTGGTGCTCACTTTAGAAGCTTGTCAATGGACTCCGATTTCTTCGATTCCCTAGGACTTTCTGGCGATGGCGATAGGTTTGGCGGGAAATTGGTAGTGGGGGAGAAGAGGGTAGTTCGTCACCGGCACAGCAATTCGATGGATGGGTCATCATCATCGGCGTTTGAGGCTGATTGCATGGTGGTTGACGGCGTGAAGAAGGCGATGGGGGCAGACAAACTCGCTGAGCTTTCCCTAATTGACCCCAAAAGAGCTAAGAGGATTCTTGCAAATCGACAATCTGCTGCCCGATCGAAGGAAAGAAAAGTTCGTTATACCGGCGAGTTGGAGAGGAAGGTTCAAACACTGCAGTCAGAAGCAACAACGCTTTCTGCGCAAGTCACAATTTTGCAGAGAGATACCACCGGGTTGTCTACAGAGAACAAGGAACTGAAACTGCGATTACAAGCTTTGGAGCAGCAAGCCCAACTTAGGGACGCTTTGAACGAAGCATTGAAAGAAGAAGTGCAGCGGCTTAAGATAGCTGCAGGGCAAATGCTGGCTGGAAATGGCAACTCGTATAGCCGAGGACTGCCTCCGCAATTCCCATCTCCACCGCCATCTCTGCATCAATTTGGCACTTCAAAGCCTCAAATTCACATGCCTCACACCTCGGCAAACCAACAGCATCGCGATCTTGGCCTCAATGGCCTTCAGTCTCATCCGGGGTTCATGGACTTCAATCCTAAAGCCGGCTGA | 1020 | 51.96 | MDMDTNFTVGKPPATAGVMDLKQMPDTPHRGSHHRRALSDTSFRLPNLDDLIFDPSDLDLSYLPSPSPSPSSGASISKFDDSSGPKLLPSGSGAVGAHFRSLSMDSDFFDSLGLSGDGDRFGGKLVVGEKRVVRHRHSNSMDGSSSSAFEADCMVVDGVKKAMGADKLAELSLIDPKRAKRILANRQSAARSKERKVRYTGELERKVQTLQSEATTLSAQVTILQRDTTGLSTENKELKLRLQALEQQAQLRDALNEALKEEVQRLKIAAGQMLAGNGNSYSRGLPPQFPSPPPSLHQFGTSKPQIHMPHTSANQQHRDLGLNGLQSHPGFMDFNPKAG | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 41664779 | 41666444 | + | Bda003013.1 | Bda01g00876 | 876 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00876 | 339 | MobiDBLite | consensus disorder prediction | 295 | 322 | - | - | |
Bda01g00876 | 339 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 175 | 238 | IPR004827 | GO:0003700|GO:0006355 | |
Bda01g00876 | 339 | MobiDBLite | consensus disorder prediction | 295 | 339 | - | - | |
Bda01g00876 | 339 | PANTHER | BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED | 13 | 319 | - | - | |
Bda01g00876 | 339 | MobiDBLite | consensus disorder prediction | 63 | 79 | - | - | |
Bda01g00876 | 339 | Pfam | bZIP transcription factor | 177 | 234 | IPR004827 | GO:0003700|GO:0006355 | |
Bda01g00876 | 339 | Gene3D | - | 176 | 229 | - | - | |
Bda01g00876 | 339 | MobiDBLite | consensus disorder prediction | 63 | 87 | - | - | |
Bda01g00876 | 339 | Coils | Coil | 200 | 220 | - | - | |
Bda01g00876 | 339 | SUPERFAMILY | Leucine zipper domain | 177 | 229 | IPR046347 | GO:0003700|GO:0006355 | |
Bda01g00876 | 339 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 13 | 319 | - | - | |
Bda01g00876 | 339 | Coils | Coil | 228 | 265 | - | - | |
Bda01g00876 | 339 | CDD | bZIP_plant_RF2 | 178 | 227 | IPR044759 | GO:0003700|GO:0006355 | |
Bda01g00876 | 339 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Bda01g00876 | 339 | SMART | brlzneu | 173 | 237 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00876 | Bda-Chr1:41664779 | Bda09g01565 | Bda-Chr9:47199338 | 6.88E-64 | dispersed | |
Bda01g00876 | Bda-Chr1:41664779 | Bda13g01410 | Bda-Chr13:36813495 | 8.00E-90 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15399 | PF00170 | bZIP_1 | 4.20E-08 | CL0018 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00876 | K20557 | - | jre:109011427 | 327.02 |