Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00937 | ATGGCCGCTGAAGCTCGACATTCAGAAGCTGAGAGCACCTCGAATTCTAACTCCAACTCTTCCTCATCCCCACCGTCCCCTTCTTCGACACCCTCCACTCACACTCTTCAGGACACTCTTTCTAACCCTGATTTTTCTTCGTCGGAACTGAAAAAGAACGAGCAAATGAGAGATACCAGCAGGCACCCACATTTCAGAGGCGTTCGGAAGCGCAGTTGGGGCAAATGGGTTTCTGAAATTCGCGAGCCTCGCAAGAAATCGCGCATTTGGCTCGGAACTTTCCCGACGCCGGAAATGGCTGCCAGAGCTCACGACGTCGCCGCTTTAAGCATCAAAGGTAGTTCCGCAATTCTTAACTTCCCCGACCTCGTTGACTTTCTTCCACGCCCGGCATCTCTCGCTCCGAGAGATGTCCAAGCGGCGGCAGTGAAGGCAGCTCAGATGTACAAATTTGAGTCGGCATCTTCGACGCCGTCGTCTTCGTTAGTTTCGGCGGCGTCGACGGAGAACGAATCGGACGATTTGGGGGAGATCGTTGAGCTGCCAAGCTTAGGAACGAGTTACGAGTCGAACGAGTTGAGGAACGAAATCGTGTTGGTGGACTCAGTGGATGGGTGGTTATACCAACCGCCATGGTTGCAAAGCTTGGAGGATAGTGGATTCAACAATGCGAGCGAGGAGTTGACTGCCGGAAGTTGCGGTTTGATAGCCGGCAGTTTTGAGAGTTTGCTTTGGGAGTATTGA | 744 | 52.69 | MAAEARHSEAESTSNSNSNSSSSPPSPSSTPSTHTLQDTLSNPDFSSSELKKNEQMRDTSRHPHFRGVRKRSWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPDLVDFLPRPASLAPRDVQAAAVKAAQMYKFESASSTPSSSLVSAASTENESDDLGEIVELPSLGTSYESNELRNEIVLVDSVDGWLYQPPWLQSLEDSGFNNASEELTAGSCGLIAGSFESLLWEY | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 42745157 | 42745900 | + | Bda003088.1 | Bda01g00937 | 937 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00937 | 247 | CDD | AP2 | 63 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | PRINTS | Ethylene responsive element binding protein signature | 65 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | PRINTS | Ethylene responsive element binding protein signature | 87 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | SUPERFAMILY | DNA-binding domain | 64 | 122 | IPR016177 | GO:0003677 | |
Bda01g00937 | 247 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Bda01g00937 | 247 | Gene3D | AP2/ERF domain | 64 | 122 | IPR036955 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | Pfam | AP2 domain | 63 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 6 | 246 | - | - | |
Bda01g00937 | 247 | ProSiteProfiles | AP2/ERF domain profile. | 64 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 6 | 246 | - | - | |
Bda01g00937 | 247 | SMART | rav1_2 | 64 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Bda01g00937 | 247 | MobiDBLite | consensus disorder prediction | 8 | 49 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00937 | Bda-Chr1:42745157 | Bda03g00430 | Bda-Chr3:3710423 | 7.76E-71 | dispersed | |
Bda11g01417 | Bda-Chr11:18701320 | Bda01g00937 | Bda-Chr1:42745157 | 5.12E-59 | transposed | |
Bda01g00937 | Bda-Chr1:42745157 | Bda11g00829 | Bda-Chr11:8213516 | 3.78E-67 | wgd | |
Bda01g00937 | Bda-Chr1:42745157 | Bda13g01332 | Bda-Chr13:35584239 | 1.98E-116 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15406 | PF00847 | AP2 | 1.90E-14 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00937 | K09286 | - | zju:107420677 | 267.314 |