Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00944 ATGGTCAATTCTATGGTGGAACGTGCCACCAGCGATATGCTGATCGGTCCTGACTGGGCGATAAACATCGAGATCTGTGATATGCTAAATCGTGACCCTTCGGATGAATCACTGCTCTGCCAAGGATTAGCTCTAAATGATGACCTGGAGCGGATACTTGCCAAACATGAAGCCATTGCTTCAGGAACTCCTATTCGAGTAGAAAACCATATTCCTGTTACTGTTACTGCAGGAGCTGTTGTTGATGTTGATGACCCTGTTGTTGATGCTGGACGCAACAGCAAACAATCCCTCACCGAAGGTTCAAATTTTGGATCATTGACTCGAAATCAATCGTTGCTTCCTATGCCTCCCGCAAGCAATGGTCTGGCTACTCTTGTAAGTGTGGATCCCAGAATGGACTTGCTGAGTGGCGACGACTATAACTCGCCCACAGCAGAGCCTTCATTGGCTCTCGTACCTATTGTACAACCACAACCAACTAGTCCTGTGTCCGAGCAGAATGCACTCATTCTTTTCGACTTGTTTTCTAATACTAGTAATGCTTCCAATTCTGCCAATATGAATGGACAAACACAATCCTTGACCTCTCAATCTCCTTATCCCAATGGAAGTACTTCCAATGTGAGTTTGCATCACAACGAGCAGTCATTGTACATGAATGGCCCCAGCACAACGTGGAATGGCCAGGCTACCCACCAGCAGCAGCCATCTCCTTCCCCAGGTTATGGTGCTCAAAGTGGCGGGTCATTACCGCCACCTCCATGGGAAGCTCAGCCTGTGGATGAAATTAGGCCAGCGACGGGTGCTCAATATCCTCATCAGATGCAGGTTACACAGGTGGTCGTCACTAATGCCCAAATTAATGAGCTTCCCCATAGACAATTTGGAAACGACCAGGTCGTTGGTATGTTTATCCAGCCAATCACAAGCAGCCAATTATCAGCCATCAACAGCCAGGTTAGTTTGAGCAATCATCTGGGATTGCACCCACCACATCAAATCCAAGGGGGGTCGTTTTTGAGTATGGTTCCACAGCCAATGCAAAATGGTCAGATGATATACTCTCTGTCTCAACAAATGCAAGGCTACGGCAACCAATACGGGGGCTACGCGTATGACTACGGACAACCCCAACAGGCAGAATACATTCAGCAAAGAACCTACGGACAACCCCAACAGGCACAATACATTCAGCAAAGAACCTATGGACTACCTCTTAGAGATGACAATGGGTTGAGAAAATCATCTTACCAGGTTTCAACAACCTCCTCTTATGTTCCACCAAGTAAACCCAGTAAGCCAGAAGACAAACTATTTGGAGATTTGGTAGACATGGCCAAGTTTAGATCCACCAAAACCACTTAG 1368 46.78 MVNSMVERATSDMLIGPDWAINIEICDMLNRDPSDESLLCQGLALNDDLERILAKHEAIASGTPIRVENHIPVTVTAGAVVDVDDPVVDAGRNSKQSLTEGSNFGSLTRNQSLLPMPPASNGLATLVSVDPRMDLLSGDDYNSPTAEPSLALVPIVQPQPTSPVSEQNALILFDLFSNTSNASNSANMNGQTQSLTSQSPYPNGSTSNVSLHHNEQSLYMNGPSTTWNGQATHQQQPSPSPGYGAQSGGSLPPPPWEAQPVDEIRPATGAQYPHQMQVTQVVVTNAQINELPHRQFGNDQVVGMFIQPITSSQLSAINSQVSLSNHLGLHPPHQIQGGSFLSMVPQPMQNGQMIYSLSQQMQGYGNQYGGYAYDYGQPQQAEYIQQRTYGQPQQAQYIQQRTYGLPLRDDNGLRKSSYQVSTTSSYVPPSKPSKPEDKLFGDLVDMAKFRSTKTT 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 42879492 42886059 - Bda003096.1 Bda01g00944 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00944 455 MobiDBLite consensus disorder prediction 414 430 - -
Bda01g00944 455 PANTHER TOM1-LIKE PROTEIN 1 34 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bda01g00944 455 PANTHER TARGET OF MYB PROTEIN 1 34 453 - -
Bda01g00944 455 PANTHER TARGET OF MYB PROTEIN 1 1 34 - -
Bda01g00944 455 PANTHER TOM1-LIKE PROTEIN 34 453 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bda01g00944 455 Gene3D - 1 52 IPR008942 -
Bda01g00944 455 SUPERFAMILY ENTH/VHS domain 3 37 IPR008942 -
Bda01g00944 455 MobiDBLite consensus disorder prediction 406 439 - -
Bda01g00944 455 MobiDBLite consensus disorder prediction 183 245 - -
Bda01g00944 455 MobiDBLite consensus disorder prediction 183 261 - -
Bda01g00944 455 SUPERFAMILY GAT-like domain 25 62 - -
Bda01g00944 455 ProSiteProfiles VHS domain profile. 9 34 IPR002014 GO:0035091|GO:0043130
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00727 Bda01g00944 CCT
Bda01g00944 Bda03g00425 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00944 Bda-Chr1:42879492 Bda03g00425 Bda-Chr3:3671051 4.30E-15 dispersed
Bda01g00684 Bda-Chr1:33988040 Bda01g00944 Bda-Chr1:42879492 2.40E-08 wgd
Bda01g00944 Bda-Chr1:42879492 Bda11g00835 Bda-Chr11:8250639 2.06E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00944 - - mnt:21390666 380.948