Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00960 ATGTGGTTGGCGAAAAACAATTTGGAAAGAAAAGACGGAGCCACTGGATTGGTAGCCATAGCCATCGACAAGGACAAAAGCAGCCAAAACGCTCTAAAATGGGCGACTGATAATATCCTCCAGAGAGGCCAAACCGCCATTCTCATCCACGTGAAGCTCAAACCCCCACCAGCTCCCAACCCTCCACTTCTCATCCCTGCAACTGCCGTCGGGATGAACACTGCAGCTGATGCAGACAACGACGATTTACCATCCTCGAAAGAGACAGATTCTGCCATCAAGGATTTGTTTGTTTCCTATCGTTGTTTTTGCACTCGTAAGGACATTCAATGCAAAGACGTTGTCCTAGAAGATGTGGATGTAGCCAAGGCATTGGTAGAATATGTCGGTCGAGCGGGCATTGAGAATTTGGTCGTTGGAGCCACGACCAAAGGTGGCTTCCTAAGATTCAAAGCAACAGACATTCCAGCCAACGTGTTGAAAGGATCGCCAGATTTCTGCAATATCTTCGTCATTTCAAAGGGGAAAGTTCAATCCACGCGCCTGGCCTCCCGCCCTGCTCCTCCTCGCTCTCCTCTCCTCGATCAATTCTTAAACCAAACCAGTCTCAGATCAGATTCATCTGACAATGCAAAGCCAGGTCAGACATCGGAAAAACCCCCCGTCGATACGCCGCGTCAATCTCATGACAAGTCCGAATTCTTCAGATCTCCGTTCGGTCGCAGAGGGCATAACGGGAAATCATACGGCGAAATCTCGTTGCCCGATACAGATATTTCTTACGTGAGCTCTGGGAGGTCGAGTATTGACCGTCCGTTCTACGACAATCAAGATCTGGGAAGGGCTACTCCACGGTTGTCGAGCACCACAGAATCGGATGTGAGTCCTAGCAGCTTCGAGTCGCAGCAATTAGGACGGAGGTCAGTCGATAGTTTTTCGCAGCTTTCTACTGAAAGTGAGAGCCTATCGACCAGATCGCAGTCTATGGAAGAAGCTGAGGCTGAGATGAGGAGGCTGAAGCTTGAACTGAAGCAAACTATGGCAATGTATAGCACCGCCTGCAAGGAAGCACTCACAGCAAAACGAACGGCGACAGAACTGCAACGCTGGAAAGTGGAAGAAGAGCGCAAACTAGAAGAAGCTCGACTAGCAGAGGAAGCTGCACTGGCAGTTGCAGAACTTGAAAAGGCTAAGTCTAGAGCAGCCATGGAGGCAGCCAATGCAGCTAGAAGAATTGCAGAGCTGGAAGCTCAGAAAAGAATAAACGCAGAGATGAAAGCCATGAAGGAATCAGAGGAGAAGAAGAAGGCCCTTTATGCTCTTGCAAATACAGACATCAGGTATAGAAAATACTCGATCGAAGAGATCGAATCTGCAACTGAGTTCTTCACCGAGTCGCTCAAGATCGGAGAAGGAGGTTACGGGCCTGTTTATAAATGTTTTCTGGATCATACTCCAGTTGCAATCAAGGTTCTTCGCCCAGACGCGTCTCAAGGAAGATCACAGTTTCAGAAAGAAGTTGAAGTTCTCAGCTGCATACGCCATCCTAACATGGTTCTTCTCCTCGGAGCCTGTCCGGAGTACGGCTGCTTAGTCTACGAATATATGGAAAACGGAAGCTTGGAAGATCGTCTGTTTCGGAGAGGGAATACTACACCTCTTTCTTGGCAGACCAGATTCAGAATCGCCGCCGAAATTGCCACCGGATTGCTGTTTCTCCACCAGACCAAGCCGGAGCCGCTTGTCCACCGTGACCTCAAACCGGGTAACATTTTGCTCTGCCGAAACTTCGTCAGCAAGATCTGCGACGTCGGATTGGCCCGACTGGTCCCACCATCGGTGGTAGATAATGTGACTCAGTATCGAATGACGTCGACGGCGGGAACGTTCTGTTACATCGATCCGGAGTATCAACAAACCGGCATGCTTGGGGTTAAATCCGACGTTTATTCTCTCGGAATCATGCTGCTGCAAATGGTTACGGCTAGACCACCTATGGGTTTAACTCACCACGTCGGAAGGGCAATAGAGAAAGGCACGTTTGCCGACATGCTAGACCCTGCCGTGCCTGACTGGCCGGTCGAACACGCTCTTTCCTTCGCCAAGCTGGCTCTGAAATGCTCCGAGCTGAGACGAAAAGACCGGCCGGATCTCGGCAAGGAAATCCTGCCGAAACTGAACAAGCTCAGAATGCTAGGCGAGGATACTATGCATCCGTCTGTAGGCGGCAGTGCAAATCCCTCCCCCAACCACAGTCAGATTTCCATGCAGCTTGTAAGTAAAAATACATGA 2292 49.91 MWLAKNNLERKDGATGLVAIAIDKDKSSQNALKWATDNILQRGQTAILIHVKLKPPPAPNPPLLIPATAVGMNTAADADNDDLPSSKETDSAIKDLFVSYRCFCTRKDIQCKDVVLEDVDVAKALVEYVGRAGIENLVVGATTKGGFLRFKATDIPANVLKGSPDFCNIFVISKGKVQSTRLASRPAPPRSPLLDQFLNQTSLRSDSSDNAKPGQTSEKPPVDTPRQSHDKSEFFRSPFGRRGHNGKSYGEISLPDTDISYVSSGRSSIDRPFYDNQDLGRATPRLSSTTESDVSPSSFESQQLGRRSVDSFSQLSTESESLSTRSQSMEEAEAEMRRLKLELKQTMAMYSTACKEALTAKRTATELQRWKVEEERKLEEARLAEEAALAVAELEKAKSRAAMEAANAARRIAELEAQKRINAEMKAMKESEEKKKALYALANTDIRYRKYSIEEIESATEFFTESLKIGEGGYGPVYKCFLDHTPVAIKVLRPDASQGRSQFQKEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMENGSLEDRLFRRGNTTPLSWQTRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLCRNFVSKICDVGLARLVPPSVVDNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQMVTARPPMGLTHHVGRAIEKGTFADMLDPAVPDWPVEHALSFAKLALKCSELRRKDRPDLGKEILPKLNKLRMLGEDTMHPSVGGSANPSPNHSQISMQLVSKNT 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43177343 43180524 + Bda003120.1 Bda01g00960 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00960 763 MobiDBLite consensus disorder prediction 270 331 - -
Bda01g00960 763 Coils Coil 380 435 - -
Bda01g00960 763 ProSiteProfiles Protein kinase domain profile. 463 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00960 763 MobiDBLite consensus disorder prediction 735 763 - -
Bda01g00960 763 MobiDBLite consensus disorder prediction 203 256 - -
Bda01g00960 763 SMART serkin_6 463 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00960 763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Bda01g00960 763 Gene3D Phosphorylase Kinase; domain 1 442 535 - -
Bda01g00960 763 MobiDBLite consensus disorder prediction 281 329 - -
Bda01g00960 763 MobiDBLite consensus disorder prediction 203 222 - -
Bda01g00960 763 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 10 760 - -
Bda01g00960 763 Pfam Protein kinase domain 464 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g00960 763 MobiDBLite consensus disorder prediction 741 763 - -
Bda01g00960 763 CDD STK_N 17 175 - -
Bda01g00960 763 SUPERFAMILY Protein kinase-like (PK-like) 444 718 IPR011009 -
Bda01g00960 763 Gene3D Transferase(Phosphotransferase) domain 1 536 738 - -
Bda01g00960 763 Gene3D HUPs 18 173 IPR014729 -
Bda01g00960 763 Coils Coil 322 349 - -
Bda01g00960 763 Pfam Universal stress protein family 19 164 IPR006016 -
Bda01g00960 763 PANTHER OS02G0152300 PROTEIN 10 760 - -
Bda01g00960 763 MobiDBLite consensus disorder prediction 223 240 - -
Bda01g00960 763 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 171 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00960 Bda-Chr1:43177343 Bda11g00887 Bda-Chr11:8708552 0 dispersed
Bda01g00960 Bda-Chr1:43177343 Bda13g01593 Bda-Chr13:39499540 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69435 PF00069 Pkinase 6.00E-40 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00960 - - twl:119993747 976.852