Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g00986 | ATGGAAGGCAGTAAAGACGGTAATGTTGACTGTGGGAGCTGCTCAAAGGAGGGTCTGCCTCCCAATCCTCTTGCGGCGGCCTATCGCCAGTGCCTTAGTACTGATCGTGTTCTAATGCCGTGTAAGAAATCGCTCGTACGCCACCAGTCGCTTATGAAGACCAATGCATTGGACGTTACTCGTGAACCTGTATTCAACAAAGATAGCCGAGATTCTAACTTCATTCCAATGGTTCGGTCTGGAGCGTGCACCGACATTGGGTTTCGTAGCAGCATGGAAGATGTATATGTTTGCATTGAAAAATTTACAAGTGCTGACCGGATTGAAAATTCTAATGATGGACCTAGTGCTTTCTATGGGGTTTTTGATGGCCATGGAGGGAAGCACGCTGCAGACTTTGCTTGTTACCATTTACCTAAATTCATAGTCGAGGACGAAGATTTCCCTGAGGATATTGAGAAGGCTGTTGCTTCAGCATTTCGTCAAACTGATACTGCCTTTGAGAAAGCTTGTTCCTCCAATGCTGCCCTTGCATCTGGCACCACAGCTTTGGCTGCTATTGTACATGGAAGGTTAGATATTGTATTTAACTATCAGTCAGTTTGTATTATAATCTTAGTTTCCAATGGCAGGTCATTGGTAGTGGCAAATGCTGGAGACTGTCGAGCAGTTCTCTGCCGTCGTGGCAAAGCCATTGAAATGTCAAGGGATCACAAGCCCATTTGCATCAGAGAGAAGAACCGGATCGAGGCATCTGGAGGATATGTTGACGATGGTTATCTCAACGGACAACTTAATGTTGCTCGAGCTCTAGGAGACTGGCACATGGAAGGAATGAAGGGTCGAGATGGTGGGCCCCTCAGTGCTGAGCCGGAGCTCATGTCTACAAAATTAACTGAGGAAGATGAATTTCTGATAATAGGATGTGATGGAATATGGGATGTATTTAGGAGCCAAAATGCCGTAGATTTTGCTAGACGGAGGCTTCAAGAGCATAACGACCCGGCCTTGTGTAGCAAGGATTTGATTGATGAGGCTTTGAAGAGAAAAAGTGGGGATAATTTAGCCGTGGTTGTGGTCTGTTTCCAATCTCCGCCTCCACCGAATTTGGTCGCTCCTCGGACAAGAGTGCAGAGGAGCTTTTCTGCTGAAGGATTGAGGGAGTTGCAAAGCTTTCTTGACAGCTTGGAAAAAGTGACTCATTGA | 1206 | 46.19 | MEGSKDGNVDCGSCSKEGLPPNPLAAAYRQCLSTDRVLMPCKKSLVRHQSLMKTNALDVTREPVFNKDSRDSNFIPMVRSGACTDIGFRSSMEDVYVCIEKFTSADRIENSNDGPSAFYGVFDGHGGKHAADFACYHLPKFIVEDEDFPEDIEKAVASAFRQTDTAFEKACSSNAALASGTTALAAIVHGRLDIVFNYQSVCIIILVSNGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPICIREKNRIEASGGYVDDGYLNGQLNVARALGDWHMEGMKGRDGGPLSAEPELMSTKLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPALCSKDLIDEALKRKSGDNLAVVVVCFQSPPPPNLVAPRTRVQRSFSAEGLRELQSFLDSLEKVTH | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 43467643 | 43469758 | + | Bda003146.1 | Bda01g00986 | 986 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g00986 | 401 | PANTHER | PROTEIN PHOSPHATASE 2C | 209 | 384 | IPR015655 | GO:0004722|GO:0006470 | |
Bda01g00986 | 401 | PANTHER | PROTEIN PHOSPHATASE 2C | 62 | 198 | IPR015655 | GO:0004722|GO:0006470 | |
Bda01g00986 | 401 | SMART | PP2C_4 | 69 | 360 | IPR001932 | - | |
Bda01g00986 | 401 | ProSitePatterns | PPM-type phosphatase domain signature. | 118 | 126 | IPR000222 | GO:0043169 | |
Bda01g00986 | 401 | Pfam | Protein phosphatase 2C | 82 | 354 | IPR001932 | - | |
Bda01g00986 | 401 | SUPERFAMILY | PP2C-like | 71 | 365 | IPR036457 | - | |
Bda01g00986 | 401 | ProSiteProfiles | PPM-type phosphatase domain profile. | 79 | 362 | IPR001932 | - | |
Bda01g00986 | 401 | CDD | PP2Cc | 78 | 362 | IPR001932 | - | |
Bda01g00986 | 401 | Gene3D | - | 58 | 365 | IPR036457 | - | |
Bda01g00986 | 401 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 62 | 198 | - | - | |
Bda01g00986 | 401 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 209 | 384 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00986 | Bda-Chr1:43467643 | Bda01g01974 | Bda-Chr1:56115802 | 1.43E-114 | dispersed | |
Bda04g00787 | Bda-Chr4:57792619 | Bda01g00986 | Bda-Chr1:43467643 | 1.64E-44 | dispersed | |
Bda01g00986 | Bda-Chr1:43467643 | Bda13g01275 | Bda-Chr13:35110645 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g00986 | K14803 | - | jre:108982376 | 575.474 |