Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g00986 ATGGAAGGCAGTAAAGACGGTAATGTTGACTGTGGGAGCTGCTCAAAGGAGGGTCTGCCTCCCAATCCTCTTGCGGCGGCCTATCGCCAGTGCCTTAGTACTGATCGTGTTCTAATGCCGTGTAAGAAATCGCTCGTACGCCACCAGTCGCTTATGAAGACCAATGCATTGGACGTTACTCGTGAACCTGTATTCAACAAAGATAGCCGAGATTCTAACTTCATTCCAATGGTTCGGTCTGGAGCGTGCACCGACATTGGGTTTCGTAGCAGCATGGAAGATGTATATGTTTGCATTGAAAAATTTACAAGTGCTGACCGGATTGAAAATTCTAATGATGGACCTAGTGCTTTCTATGGGGTTTTTGATGGCCATGGAGGGAAGCACGCTGCAGACTTTGCTTGTTACCATTTACCTAAATTCATAGTCGAGGACGAAGATTTCCCTGAGGATATTGAGAAGGCTGTTGCTTCAGCATTTCGTCAAACTGATACTGCCTTTGAGAAAGCTTGTTCCTCCAATGCTGCCCTTGCATCTGGCACCACAGCTTTGGCTGCTATTGTACATGGAAGGTTAGATATTGTATTTAACTATCAGTCAGTTTGTATTATAATCTTAGTTTCCAATGGCAGGTCATTGGTAGTGGCAAATGCTGGAGACTGTCGAGCAGTTCTCTGCCGTCGTGGCAAAGCCATTGAAATGTCAAGGGATCACAAGCCCATTTGCATCAGAGAGAAGAACCGGATCGAGGCATCTGGAGGATATGTTGACGATGGTTATCTCAACGGACAACTTAATGTTGCTCGAGCTCTAGGAGACTGGCACATGGAAGGAATGAAGGGTCGAGATGGTGGGCCCCTCAGTGCTGAGCCGGAGCTCATGTCTACAAAATTAACTGAGGAAGATGAATTTCTGATAATAGGATGTGATGGAATATGGGATGTATTTAGGAGCCAAAATGCCGTAGATTTTGCTAGACGGAGGCTTCAAGAGCATAACGACCCGGCCTTGTGTAGCAAGGATTTGATTGATGAGGCTTTGAAGAGAAAAAGTGGGGATAATTTAGCCGTGGTTGTGGTCTGTTTCCAATCTCCGCCTCCACCGAATTTGGTCGCTCCTCGGACAAGAGTGCAGAGGAGCTTTTCTGCTGAAGGATTGAGGGAGTTGCAAAGCTTTCTTGACAGCTTGGAAAAAGTGACTCATTGA 1206 46.19 MEGSKDGNVDCGSCSKEGLPPNPLAAAYRQCLSTDRVLMPCKKSLVRHQSLMKTNALDVTREPVFNKDSRDSNFIPMVRSGACTDIGFRSSMEDVYVCIEKFTSADRIENSNDGPSAFYGVFDGHGGKHAADFACYHLPKFIVEDEDFPEDIEKAVASAFRQTDTAFEKACSSNAALASGTTALAAIVHGRLDIVFNYQSVCIIILVSNGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPICIREKNRIEASGGYVDDGYLNGQLNVARALGDWHMEGMKGRDGGPLSAEPELMSTKLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPALCSKDLIDEALKRKSGDNLAVVVVCFQSPPPPNLVAPRTRVQRSFSAEGLRELQSFLDSLEKVTH 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43467643 43469758 + Bda003146.1 Bda01g00986 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g00986 401 PANTHER PROTEIN PHOSPHATASE 2C 209 384 IPR015655 GO:0004722|GO:0006470
Bda01g00986 401 PANTHER PROTEIN PHOSPHATASE 2C 62 198 IPR015655 GO:0004722|GO:0006470
Bda01g00986 401 SMART PP2C_4 69 360 IPR001932 -
Bda01g00986 401 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Bda01g00986 401 Pfam Protein phosphatase 2C 82 354 IPR001932 -
Bda01g00986 401 SUPERFAMILY PP2C-like 71 365 IPR036457 -
Bda01g00986 401 ProSiteProfiles PPM-type phosphatase domain profile. 79 362 IPR001932 -
Bda01g00986 401 CDD PP2Cc 78 362 IPR001932 -
Bda01g00986 401 Gene3D - 58 365 IPR036457 -
Bda01g00986 401 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 62 198 - -
Bda01g00986 401 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 209 384 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00986 Bda-Chr1:43467643 Bda01g01974 Bda-Chr1:56115802 1.43E-114 dispersed
Bda04g00787 Bda-Chr4:57792619 Bda01g00986 Bda-Chr1:43467643 1.64E-44 dispersed
Bda01g00986 Bda-Chr1:43467643 Bda13g01275 Bda-Chr13:35110645 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g00986 K14803 - jre:108982376 575.474