Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01015 CTGCCGATGGAAAACAGAGCCCTGTCTTTCTTCTTCCTTCTCGTCTTCTGCATAGGGTTTTCAGAAGGCAGAGAAATCATCGTAGGCGGAAAGTCTGACACATGGGAAATCCCCTCCTCCTCTCACTCCCAGCCTCTCAATGAATGGGCTCAATCCACTCGTTTTCGCGTCGGCGATGCTCTCGTGTGGAATTACGACGGCAAAAAAGACTCCGTTCTGTTAGTATCCGAGGAAGATTACGCGTCCTGCAATACATCTACCCCAATCGCAGAGTACAAGGACGGAAACACAAAGCTGAAGCTGGAGCGAGCAGGACCTTACTATTTCATCAGTGGAGCCAAGGGCCACTGCGAGCAGGGCCAGAAGATGATCGTAGTGGTTCTTTCTCCGAGAAACCGCCACTTTTCATTTTCTCCGGCTCCTTCGCCCGCACAGTCAGAGGGTCCGGCCGTTGCTCCCTCCAGCCGTGGTTCCAATCTTCAGGGTGGTTTAGTAGTAGCAGTAATTGGACTTCTGGGTGTAGGTGCTATCATGGGTTGA 540 52.04 LPMENRALSFFFLLVFCIGFSEGREIIVGGKSDTWEIPSSSHSQPLNEWAQSTRFRVGDALVWNYDGKKDSVLLVSEEDYASCNTSTPIAEYKDGNTKLKLERAGPYYFISGAKGHCEQGQKMIVVVLSPRNRHFSFSPAPSPAQSEGPAVAPSSRGSNLQGGLVVAVIGLLGVGAIMG 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43707226 43707855 + Bda003172.1 Bda01g01015 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01015 179 Gene3D - 23 132 IPR008972 -
Bda01g01015 179 CDD OsENODL1_like 24 128 IPR041846 -
Bda01g01015 179 Pfam Plastocyanin-like domain 40 121 IPR003245 GO:0009055
Bda01g01015 179 PANTHER EARLY NODULIN-LIKE PROTEIN 3 9 171 - -
Bda01g01015 179 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Bda01g01015 179 ProSiteProfiles Phytocyanin domain profile. 24 129 IPR003245 GO:0009055
Bda01g01015 179 MobiDBLite consensus disorder prediction 137 158 - -
Bda01g01015 179 PANTHER BLUE COPPER PROTEIN 9 171 IPR039391 GO:0009055
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01015 Bda-Chr1:43707226 Bda07g00343 Bda-Chr7:4485962 3.44E-31 dispersed
Bda01g01015 Bda-Chr1:43707226 Bda09g00514 Bda-Chr9:6802308 4.23E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01015 - - csv:101210664 216.853