Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01021 ATGAATGATCGCTCACATCTTGAACCAGTTGATTCTGAGTTTGTCGAAGTCGATCCAACTGGAAGATATGGACGATACAGTGAAATCCTTGGAAAAGGAGCTTCCAAGACGGTTTACCGAGCATTTGATGAGTACGAAGGGATTGAAGTTGCTTGGAATCAGATCAAACTCTATGATTTTCTGCAATGTCCAGAAGATCTGGAGAGGCTCTACAGTGAAATCCATCTCCTAAAAACATTGAAGCACAAAAATATTATGAAATTCTACACTTCTTGGGTCGATACTTCCAATAGGAACATCAATTTTGTCACTGAAATGTTCACTTCTGGAACCCTAAGACAGTATAGGCTAAAGCATAGGAGAGTAAACATTAGAGCCGTGAAGCATTGGTGTAGACAGATCTTGAAAGGGCTTCATTATCTTCATAGCCATGATCCACCTGTGATTCACAGAGATCTAAAGTGTGATAATATCTTTGTGAATGGAAATCAAGGAGAGGTGAAGATTGGAGATCTTGGCCTTGCTGCGATTCTCCGAAAATCATTTGCCGATCATTGTGTTGGAACACCGGAATTTATGGCTCCGGAAGTGTACAAAGAGGCATACAATGAATTAGTAGACATCTATTCATTTGGTATGTGCATACTGGAAATGGTAACATTTGAATATCCATACAGTGAATGTACTCATCCTGCCCAGATCTACAAGAAAGTTATTTCTGGAAAAAAACCGGATGCCTTGTACAAAGTGAAGGATCCAGAAGTAAAACAATTTGTCGAGAAATGTTTGGCAACAATTTCACTTAGGCTATCGGCAAAGGAGCTGTTGAATGACCCTTTTCTCCAAATTGAAGATTGTGAATATGAGATGAGATCCTTGGACTGTGGGTTTAGGGACGTGGGTCTGACGATAAGGCAGACTTTCTTCGATCTAAATGGGAGTAAAAGTACCCTTTGTAATGGAGTTTCTGATGATTATAATTATTTTGATGCTTCGAGTGAATGGGGGTATTCTCCAGCTGAAGTCGGGCACAGTGGAATCGAGCTTTTTGAGCGTCACGACGATGGACATTGCGAAGATGTTGACGTAAGTATTAAAGGGAAGAGGAGAGAAAATGGTGATATCTTTCTGAGACTAAGAATTACAGATAAAGATGGCCTGATCCGAAACATATATTTCCCTTTTGACGTTGAGATCGATACAGCACTCAGCGTAGCAACTGAAATGGTGGCGGAACTCGATCTAATGGACCAAGATGTGACAAGAATAGCAGATATGATTGACGGGGAGATTGCTTCCATGGTTCCCCAATGGAGGCTCGGGCATGGCATGGAGGATTCGATTAATTTTGCTGATCAAACTTTTTGTCAGAATTGTGCGTCGAATCGGACATCATATGGATCTTTAATGGAGTATTTGACGACTGATTCTTCTGGAAAGAACTTGCAGGTTTATCAGTGCTGTAAAAATGGCTGTGCCACTACTCACGGCCGTTTCGAGGAGATTACCTTCCAAGCGACTGATGCCTCCGAGAATGATATGAAAGAGCCTGCTTTGAACGCGTTGAGCCAATCGAATTGCCTTAATTATCAGGAGACTTTGGGAGGCCATGAATTTAGCTCAGCAAGCTTTGAACCAAATCATTCTGACAAAGAATATGAAGAAACAGATCGGCAAATGTCAAAAATCGAAACAAGTGGAAGTTTTCGAGGAGACTCGGGTATGTTTTTTCCAAAAGCTAGAAAACGGAAGCATGATGTTTTAATTGATTCGAGTTTTCTGAACATAAAACCAAAAACAGTTTTTGAAAACATACCCTTTTAG 1824 40.68 MNDRSHLEPVDSEFVEVDPTGRYGRYSEILGKGASKTVYRAFDEYEGIEVAWNQIKLYDFLQCPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTSNRNINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILKGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSFADHCVGTPEFMAPEVYKEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVKQFVEKCLATISLRLSAKELLNDPFLQIEDCEYEMRSLDCGFRDVGLTIRQTFFDLNGSKSTLCNGVSDDYNYFDASSEWGYSPAEVGHSGIELFERHDDGHCEDVDVSIKGKRRENGDIFLRLRITDKDGLIRNIYFPFDVEIDTALSVATEMVAELDLMDQDVTRIADMIDGEIASMVPQWRLGHGMEDSINFADQTFCQNCASNRTSYGSLMEYLTTDSSGKNLQVYQCCKNGCATTHGRFEEITFQATDASENDMKEPALNALSQSNCLNYQETLGGHEFSSASFEPNHSDKEYEETDRQMSKIETSGSFRGDSGMFFPKARKRKHDVLIDSSFLNIKPKTVFENIPF 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 43810050 43813315 - Bda003179.1 Bda01g01021 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01021 607 MobiDBLite consensus disorder prediction 544 561 - -
Bda01g01021 607 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01021 607 CDD STKc_WNK 22 281 - -
Bda01g01021 607 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01021 607 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01021 607 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 568 - -
Bda01g01021 607 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Bda01g01021 607 MobiDBLite consensus disorder prediction 539 561 - -
Bda01g01021 607 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Bda01g01021 607 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Bda01g01021 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Bda01g01021 607 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 568 - -
Bda01g01021 607 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 430 IPR024678 GO:0004674|GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01021 Bda08g01022 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01021 Bda-Chr1:43810050 Bda08g01022 Bda-Chr8:21132368 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69437 PF00069 Pkinase 3.20E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01021 K08867 - zju:107412222 871.307