Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01054 ATGGCGTTCTCGGAAAACTCCTCCCGTCACTCTCTCATCCCCAGCTTCCTCTACTCGACCTCTTCCTCCACCAAATCCATAGCCGTCGAGAAGATGCTCCGGAATAGCCCTAGCGGCCTCTCTTCCCCCGCTCCTGCTGCCGATGCTATTCCGTTGTCGAAGAGCAGCTTTGTGATTCCGTCTCCAAGCGAGCAGAGCAAGAAGATCGAGATGTACTCCCCGGCCTTCTACGCTGCGTGTACTGCTGGTGGAATCCTTAGCTGCGGTCTTACGCATATGGCCGTCACTCCTCTTGACCTTGTCAAATGTAATATGCAGATCGACCCAGCAAAATACAAAAGCATTTCATCCGGATTTGGGGTCTTGCTCAAGGAGCAGGGAGTTAGGGGCTTCTTTAGGGGTTGGGTGCCTACCCTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTCTATGAATTTTTTAAGAAATACTACTCAGATATTGCTGGACCAGAATATGCCGCTAAGTATAAGACCTTGATTTATCTAGCTGGATCAGCATCTGCAGAGGTGATTGCAGATATTGCCCTTTGTCCCTTTGAAGCCGTGAAAGTCCGGGTTCAAACTCAACCTGGTTTTGCTAGAGGTCTGTCGGACGGCCTTCCTAAATTTGTCAGATCTGAAGGCACTCTTGGGTTGTATAAGGGTATTGTTCCTCTCTGGGGACGTCAGATTCCATATACGATGATGAAGTTTGCATCCTTTGAAACTATTGTGGAGTTGATCTATAAGCATGCTATTCCAACACCCAAGGACCAGTGCAGCAAAAATCTACAGCTTGGTATTAGTTTTGCTGGTGGCTACGTAGCTGGTGTTTTTTGTGCAATTGTTTCTCATCCTGCTGATAATCTTGTTTCTTTTCTCAACAATGCCAAAGGGGCAACTGTTGGTGATGTAAGTGCTTTACTTTCAAATGAATTTTTCTTTGATATCTATCAATCGTTTAATTTTATTTCTTTGTGGGTTGTGCAGGCTGTTAAGAAACTTGGTTTATGGGGTCTCTTTACCCGTGGGCTTCCCCTCCGTATTGTCATGATTGGAACACTCACTGGAGCTCAGTGGGGTATTTACGATGCATTCAAAGTTTTTGTGGGACTGCCAACTACTGGTGGTGTAACTCCTGCCCCTGCTGCTGCTGCTTCAGAACTTGCGAAAGTTTAG 1206 46.68 MAFSENSSRHSLIPSFLYSTSSSTKSIAVEKMLRNSPSGLSSPAPAADAIPLSKSSFVIPSPSEQSKKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKDQCSKNLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDVSALLSNEFFFDIYQSFNFISLWVVQAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVTPAPAAAASELAKV 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 44699037 44701514 + Bda003220.2 Bda01g01054 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01054 401 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 337 395 - -
Bda01g01054 401 Gene3D Mitochondrial carrier domain 75 329 IPR023395 -
Bda01g01054 401 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 4 315 - -
Bda01g01054 401 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Bda01g01054 401 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Bda01g01054 401 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 337 395 IPR044677 GO:0005315|GO:1990547
Bda01g01054 401 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 315 IPR044677 GO:0005315|GO:1990547
Bda01g01054 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Bda01g01054 401 SUPERFAMILY Mitochondrial carrier 78 374 IPR023395 -
Bda01g01054 401 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01054 Bda-Chr1:44699037 Bda11g00531 Bda-Chr11:5586906 2.49E-06 dispersed
Bda01g01046 Bda-Chr1:44575451 Bda01g01054 Bda-Chr1:44699037 4.94E-15 proximal
Bda11g01581 Bda-Chr11:49077833 Bda01g01054 Bda-Chr1:44699037 0 transposed
Bda01g01054 Bda-Chr1:44699037 Bda13g01890 Bda-Chr13:43275700 1.23E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01054 K15102 - csv:101221771 574.318