Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01064 ATGGAAAACTATCAACTGTTCTTCCCTTGCTCTTCCTCCACCACACTCTCAGTTTATGCCGATGGCTTCCATTGCCAGAGTTCAAATGATTCTTTCCGGGGGATGAAGACGACATCGCAGTTTCTTGATATCCCGAGGGGTGAACCAAAAAACATGTTTCAGAGCGGAAGCAATGACGTCGAATTTGGTCGAAAGAAGAGGGATAAGAAGATCAAAAAACCTAAATTTTCCTTCCAAACTCGTAGTCCGGTTGACATACTTGACGATGGCTATCGATGGAGGAAATACGGTCAGAAAGCAGTCAAGAATAACAAATTTCCCAGGAGCTATTACCGGTGCACGCACGAGGGGTGCAAAGTGAAGAAGCAAGTTCAAAGAGTAACAGGAGATGAGGGGCTTGTGGTGACGACCTATGAAAGCATTCACACACATCCCCTTGACAAACCCACCGATAACTTCGAGCATATCCTGAATCAGATGCAAATCTACCCTCCACTTTTCACTTGA 507 45.17 MENYQLFFPCSSSTTLSVYADGFHCQSSNDSFRGMKTTSQFLDIPRGEPKNMFQSGSNDVEFGRKKRDKKIKKPKFSFQTRSPVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHEGCKVKKQVQRVTGDEGLVVTTYESIHTHPLDKPTDNFEHILNQMQIYPPLFT 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 44875169 44875777 + Bda003231.1 Bda01g01064 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01064 168 ProSiteProfiles WRKY domain profile. 82 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01064 168 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 163 IPR044810 GO:0003700
Bda01g01064 168 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 1 163 - -
Bda01g01064 168 SMART WRKY_cls 87 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01064 168 Gene3D WRKY domain 64 147 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g01064 168 MobiDBLite consensus disorder prediction 46 66 - -
Bda01g01064 168 Pfam WRKY DNA -binding domain 88 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01064 168 SUPERFAMILY WRKY DNA-binding domain 79 146 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01064 Bda07g01384 CCT
Bda01g01064 Bda07g01384 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01064 Bda-Chr1:44875169 Bda07g01384 Bda-Chr7:16682238 1.94E-58 dispersed
Bda01g01064 Bda-Chr1:44875169 Bda05g00405 Bda-Chr5:49364112 2.15E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15415 PF03106 WRKY 1.20E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01064 - - tcc:18601047 202.601