Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01079 GGAACGTCAGCCTTCTGTGTGATTCGATGTGCTTCTTCGAATGGACGGGAGCCTGAATCAGTGGAGAAAAATGGCGTTAAGGAAGTGGAGCGACTTCTTGGAGAGAAAAGACGAGCAGAGTTGTCTGCTAGGATTGCGTCTGGAGAATTCACTGTTAAGAAGTCTGGCTTGACATCTCAGCTGAGGAATGGCTTGTCGAAGATGGGCGTTCCAAGTGAGATTCTAAATGTTTTATTTAGTTGGTATGATCCTTATGATCATCCTAAGATTCCAGAGGCCAAAGGGTCAATTAAATCCATGAGAAGTGAGGCCTTCTTCATACCATTATACGAGCTTTTTCTCACATACGGTGGAATGTTTAGGCTAAGCTTTGGGCCCAAGTCATTTTTGATAGTTTCTGATCCTTCCATCGCTAAGCATATATTGAAGGACAACTCAAAATCTTATTCGAAGGGGATCTTGGCTGAAATTCTTGAATTTGTAATGGGAAATGGACTAATTCCAGCTGATGGTGAGATCTGGCGTGTACGTCGGCGAGCTATAGTCCCAGCGCTGCATAAGAAGTATGTAGCAGCTATGGTTAAGCTCTTCGGACTAGCGACCGATAGGCTTTGCAAGAAGCTAGATGCTGCTGCTTCCGATGGAGAAGACGTGGAAATGGAGTCATTATTCTCTCACTTGACTTTGGATATCATTGGAAAAGCTCTGTTTAATTATGATTTCGATTCATTGACAAATGATACTGGAATAGTTGAGGCTGTGTACACTGTACTAAGAGAAGCAGAAGATCGTAGTATTTCCCCGATTCCATTATGGGAAATTCCAATTTGGAGAGAAATTTCGCCCAGACAAAGAAAGGTTTCTAAAGCCCTCAAAGTAATTAACGACACACTTGATGATCTGATTGCGATATGCAAGAGGATGGTTGATGAAGAAGAACTACAATTTTCTGAGGAATACATGAATGAACAAGATCCTAGTATATTACACTTCCTTTTGGCTTCAGGAGATGATGTTTCAAGCAGGCAACTGCGCGATGACTTGATGACAATGCTTATAGCTGGGCATGAAACCTCTGCTGCAGTTTTAACCTGGACGTTTTATCTTCTTTCCAGGGATCCAGAGGTTGTGTCGAAATTGCAAGAGGAGGTTGATACAGTTTTGGGTGATCGATTTCCAACTATTGAAGATATGAAGAAGCTCAAATACGCCACTCGAGTAATCAATGAATCCTTGAGGCTTTACCCACAACCACCTGTTTTAATACGTCGATCTATCGAGAATGACATTCTTGGAGGTTACCCAATCAAAAGAGGGGAGGATATCTTCATTTCTGTTTGGAATTTGCATCATTCACCAAAAGTTTGGGATGACGCAGAGAAGTTTAACCCAGAGAGATGGCCCTTGGATGGGCCAAACCCAAATGAAACAAACCAAAATTTCAGTTATTTGCCCTTTGGCGGTGGACCTCGGAAATGCGTTGGTGACATGTTTGCTTCATTTGAGACTGTGGTGGCGCTTGCCATGCTTGTTCGTCGATTTAACTTTCAAATGGCTCTTGGAGCAGCCGAGGTTAAGATGACTACAGGAGCAACAATTCACACGACGGACGGATTGAAAATGACTGTCACGCGAAGAACAAGGCCTCCTATTTTGCCGACGCTAGAAATGCCATCGATAAAAGGAGATTCGGGCATTGGCCCATCAGAAACGGATCTACCTATTGGCGTGAAAGCACAAGTTTCTTCTGCTCCCCTATGA 1761 43.21 GTSAFCVIRCASSNGREPESVEKNGVKEVERLLGEKRRAELSARIASGEFTVKKSGLTSQLRNGLSKMGVPSEILNVLFSWYDPYDHPKIPEAKGSIKSMRSEAFFIPLYELFLTYGGMFRLSFGPKSFLIVSDPSIAKHILKDNSKSYSKGILAEILEFVMGNGLIPADGEIWRVRRRAIVPALHKKYVAAMVKLFGLATDRLCKKLDAAASDGEDVEMESLFSHLTLDIIGKALFNYDFDSLTNDTGIVEAVYTVLREAEDRSISPIPLWEIPIWREISPRQRKVSKALKVINDTLDDLIAICKRMVDEEELQFSEEYMNEQDPSILHFLLASGDDVSSRQLRDDLMTMLIAGHETSAAVLTWTFYLLSRDPEVVSKLQEEVDTVLGDRFPTIEDMKKLKYATRVINESLRLYPQPPVLIRRSIENDILGGYPIKRGEDIFISVWNLHHSPKVWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFETVVALAMLVRRFNFQMALGAAEVKMTTGATIHTTDGLKMTVTRRTRPPILPTLEMPSIKGDSGIGPSETDLPIGVKAQVSSAPL 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45507272 45514377 + Bda003259.1 Bda01g01079 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01079 586 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 486 495 IPR017972 GO:0005506|GO:0016705
Bda01g01079 586 PANTHER - 85 550 - -
Bda01g01079 586 Gene3D Cytochrome P450 87 551 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 MobiDBLite consensus disorder prediction 554 573 - -
Bda01g01079 586 Pfam Cytochrome P450 109 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 113 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 493 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 363 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 343 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS E-class P450 group I signature 483 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS P450 superfamily signature 484 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS P450 superfamily signature 354 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS P450 superfamily signature 493 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 SUPERFAMILY Cytochrome P450 101 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01079 586 PANTHER CYTOCHROME P450 FAMILY 4 85 550 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01079 Bda-Chr1:45507272 Bda13g01856 Bda-Chr13:42723619 0 dispersed
Bda01g01076 Bda-Chr1:45403356 Bda01g01079 Bda-Chr1:45507272 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01079 K15747 - qsu:112021689 970.304