Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01087 | ATGTTGCTCAACACGCAGGCTCTGCTATCTCCCACCACCGGAACTTTTCCTACTCCGGTTATGAATGATGATAATTCAATGCTCACTCCCGTAACTCTCGAAGAAGCATATAAAGACAGCAGTACATGTTCCTCTTTCAGGGTCATATCTAATGGGGATCATGATTCTCTACCAGGTTCTATGAGCATAGAGAATCAAGATGCTGATGTTGATTGTCATACCATTGAATCTGAGCAACTCTCAATTGATTTTGAGCTCCCAGTAGAGTTTCCGACCAACATTCCTGCAATGAACTGTCCAGCTATTGATTCATCAAAAGTTCCAAAATTTTATACAAATGGAATGTGTGGTGATTTGCATGACTGTCGTTTTGACATAGCGAGCGATCCAACATCTTTGATAAAGGAATCGGCACGCACGGAAGATATTGAAACAGACCATCCCGCCGAAGGAGAGCCTAAAGGATCATACCTTTCAGGGGGAATTCAAAGGACTTCAGCGGATGGATACAACTGGAGAAAATACGGACAGAAGCAGGTGAAGGGTAGTGAATATCCGAGGAGCTACTATAAGTGTACGTATTCAAATTGTCCGGTAAAGAAAAAAGTAGAACGCTCACATGATGGTCAAATAACAGAAATAATCTACAAGGGGGCTCATAATCACGAAAAGCCTCAGGCTGGATCAACTTTATCCCTTGCCGATGCTTCAGAGATGGGAGAAAGTAGTCGTCGTGGCATCAAAATTGAAAGTGGGCCAGCTTGGAGAAATCTTCAGTCAGGGTCGAAAGATTTTACATTAATCCCAGACCGGAGGGCTGATGGAGTGGAAAGGACATCCCCAACATCTGTTGTAACCGAGCTCTCTGATCCATTCTCATCGGCGCATATGAAAACTGTCGGGTTTGAACCAGCAGGAGCTGCAGATCTTTCATCCACCTTTGCCAGTCATGACGACGATGATAGGGCTACTCAGGGAAGTATATCAACCGACAATGACGTAGATGATGAGGAATCTGAATCAAAAAGAAGGCGTACAGATGGCTATTTTGTTGAAACGAATTTGTCATCAAGGGCTGTAAGAGAGCCGAGAGTTGTTATTCAAATAGAAAGTGAGGTTGACATTCTCGATGATGGATACCGATGGCGAAAATACGGGCAAAAGGTCGTGAAGGGAAATCCAAACCCCAGAAGCTACTACAAATGTACAAGTGCTGGATGTTCCGTAAGGAAACACGTGGAGAGGGCATCGAATAATCTAAAATGTGTACTTACGACGTACGAAGGTCGACACAATCATGAAGTTCCTGCAGCCCGTAGCAGCAATCAAATCTCTTCAATCTGCGATACCACACATCCAAACAACGCTCAGCCAGCCATATCCCAAGCTGACGGTGTTTCAAAGGCCGAAACAAAAGTTCATTTTGATCGAAAATCCGAGTTCAACAACGCATATACCAGACCAGGATGTCTCGGCAATTTCAGCACCGATATGAAATTAGGGACTTCATCAATCTACCCTCTGAAGATTCCTTTTTTGCAGAATCACATTTCATATGGCTCATTTGGGTTAGATCCTAAATACACTACAACGAGCCATTCTAGCTGTATCACCTCCATAGTTCCAGACTTCCCCATTTCGCTACCATTGAATCCGAACCTTTCTGCTCCTGGTTTGAACTTGAGTACCGGAAGAACATTAGGTCCAGTTCAGACATTGGTTGGTAGGTCACAGCTTAAGGACGATGAAGTCGGATTTATGAAGCCGAAACAAGAGGAGAAGGATGATAAGCTTTCCCATGTCTCCATGGCTGCACTTGATAATGGCAATTTATCGTCACTGTGGTCATCCCCATCAGTTTATCAATGCAGGGGCAATAATCATTTTCCTTAG | 1893 | 43.85 | MLLNTQALLSPTTGTFPTPVMNDDNSMLTPVTLEEAYKDSSTCSSFRVISNGDHDSLPGSMSIENQDADVDCHTIESEQLSIDFELPVEFPTNIPAMNCPAIDSSKVPKFYTNGMCGDLHDCRFDIASDPTSLIKESARTEDIETDHPAEGEPKGSYLSGGIQRTSADGYNWRKYGQKQVKGSEYPRSYYKCTYSNCPVKKKVERSHDGQITEIIYKGAHNHEKPQAGSTLSLADASEMGESSRRGIKIESGPAWRNLQSGSKDFTLIPDRRADGVERTSPTSVVTELSDPFSSAHMKTVGFEPAGAADLSSTFASHDDDDRATQGSISTDNDVDDEESESKRRRTDGYFVETNLSSRAVREPRVVIQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASNNLKCVLTTYEGRHNHEVPAARSSNQISSICDTTHPNNAQPAISQADGVSKAETKVHFDRKSEFNNAYTRPGCLGNFSTDMKLGTSSIYPLKIPFLQNHISYGSFGLDPKYTTTSHSSCITSIVPDFPISLPLNPNLSAPGLNLSTGRTLGPVQTLVGRSQLKDDEVGFMKPKQEEKDDKLSHVSMAALDNGNLSSLWSSPSVYQCRGNNHFP | 630 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 45596473 | 45600200 | - | Bda003267.1 | Bda01g01087 | 1087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01087 | 630 | MobiDBLite | consensus disorder prediction | 218 | 252 | - | - | |
Bda01g01087 | 630 | SUPERFAMILY | WRKY DNA-binding domain | 370 | 436 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | SUPERFAMILY | WRKY DNA-binding domain | 165 | 225 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | Gene3D | WRKY domain | 363 | 429 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | MobiDBLite | consensus disorder prediction | 311 | 347 | - | - | |
Bda01g01087 | 630 | Pfam | WRKY DNA -binding domain | 377 | 434 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | Pfam | WRKY DNA -binding domain | 168 | 223 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 567 | IPR044810 | GO:0003700 | |
Bda01g01087 | 630 | MobiDBLite | consensus disorder prediction | 138 | 161 | - | - | |
Bda01g01087 | 630 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 1 | 567 | - | - | |
Bda01g01087 | 630 | Gene3D | WRKY domain | 161 | 226 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | ProSiteProfiles | WRKY domain profile. | 168 | 225 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | ProSiteProfiles | WRKY domain profile. | 371 | 436 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | SMART | WRKY_cls | 376 | 435 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda01g01087 | 630 | SMART | WRKY_cls | 166 | 224 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01087 | Bda-Chr1:45596473 | Bda09g01561 | Bda-Chr9:47169033 | 7.35E-77 | dispersed | |
Bda01g01087 | Bda-Chr1:45596473 | Bda12g00951 | Bda-Chr12:40590110 | 1.53E-77 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15416 | PF03106 | WRKY | 7.20E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01087 | K18835 | - | zju:107412508 | 633.639 |