Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01087 ATGTTGCTCAACACGCAGGCTCTGCTATCTCCCACCACCGGAACTTTTCCTACTCCGGTTATGAATGATGATAATTCAATGCTCACTCCCGTAACTCTCGAAGAAGCATATAAAGACAGCAGTACATGTTCCTCTTTCAGGGTCATATCTAATGGGGATCATGATTCTCTACCAGGTTCTATGAGCATAGAGAATCAAGATGCTGATGTTGATTGTCATACCATTGAATCTGAGCAACTCTCAATTGATTTTGAGCTCCCAGTAGAGTTTCCGACCAACATTCCTGCAATGAACTGTCCAGCTATTGATTCATCAAAAGTTCCAAAATTTTATACAAATGGAATGTGTGGTGATTTGCATGACTGTCGTTTTGACATAGCGAGCGATCCAACATCTTTGATAAAGGAATCGGCACGCACGGAAGATATTGAAACAGACCATCCCGCCGAAGGAGAGCCTAAAGGATCATACCTTTCAGGGGGAATTCAAAGGACTTCAGCGGATGGATACAACTGGAGAAAATACGGACAGAAGCAGGTGAAGGGTAGTGAATATCCGAGGAGCTACTATAAGTGTACGTATTCAAATTGTCCGGTAAAGAAAAAAGTAGAACGCTCACATGATGGTCAAATAACAGAAATAATCTACAAGGGGGCTCATAATCACGAAAAGCCTCAGGCTGGATCAACTTTATCCCTTGCCGATGCTTCAGAGATGGGAGAAAGTAGTCGTCGTGGCATCAAAATTGAAAGTGGGCCAGCTTGGAGAAATCTTCAGTCAGGGTCGAAAGATTTTACATTAATCCCAGACCGGAGGGCTGATGGAGTGGAAAGGACATCCCCAACATCTGTTGTAACCGAGCTCTCTGATCCATTCTCATCGGCGCATATGAAAACTGTCGGGTTTGAACCAGCAGGAGCTGCAGATCTTTCATCCACCTTTGCCAGTCATGACGACGATGATAGGGCTACTCAGGGAAGTATATCAACCGACAATGACGTAGATGATGAGGAATCTGAATCAAAAAGAAGGCGTACAGATGGCTATTTTGTTGAAACGAATTTGTCATCAAGGGCTGTAAGAGAGCCGAGAGTTGTTATTCAAATAGAAAGTGAGGTTGACATTCTCGATGATGGATACCGATGGCGAAAATACGGGCAAAAGGTCGTGAAGGGAAATCCAAACCCCAGAAGCTACTACAAATGTACAAGTGCTGGATGTTCCGTAAGGAAACACGTGGAGAGGGCATCGAATAATCTAAAATGTGTACTTACGACGTACGAAGGTCGACACAATCATGAAGTTCCTGCAGCCCGTAGCAGCAATCAAATCTCTTCAATCTGCGATACCACACATCCAAACAACGCTCAGCCAGCCATATCCCAAGCTGACGGTGTTTCAAAGGCCGAAACAAAAGTTCATTTTGATCGAAAATCCGAGTTCAACAACGCATATACCAGACCAGGATGTCTCGGCAATTTCAGCACCGATATGAAATTAGGGACTTCATCAATCTACCCTCTGAAGATTCCTTTTTTGCAGAATCACATTTCATATGGCTCATTTGGGTTAGATCCTAAATACACTACAACGAGCCATTCTAGCTGTATCACCTCCATAGTTCCAGACTTCCCCATTTCGCTACCATTGAATCCGAACCTTTCTGCTCCTGGTTTGAACTTGAGTACCGGAAGAACATTAGGTCCAGTTCAGACATTGGTTGGTAGGTCACAGCTTAAGGACGATGAAGTCGGATTTATGAAGCCGAAACAAGAGGAGAAGGATGATAAGCTTTCCCATGTCTCCATGGCTGCACTTGATAATGGCAATTTATCGTCACTGTGGTCATCCCCATCAGTTTATCAATGCAGGGGCAATAATCATTTTCCTTAG 1893 43.85 MLLNTQALLSPTTGTFPTPVMNDDNSMLTPVTLEEAYKDSSTCSSFRVISNGDHDSLPGSMSIENQDADVDCHTIESEQLSIDFELPVEFPTNIPAMNCPAIDSSKVPKFYTNGMCGDLHDCRFDIASDPTSLIKESARTEDIETDHPAEGEPKGSYLSGGIQRTSADGYNWRKYGQKQVKGSEYPRSYYKCTYSNCPVKKKVERSHDGQITEIIYKGAHNHEKPQAGSTLSLADASEMGESSRRGIKIESGPAWRNLQSGSKDFTLIPDRRADGVERTSPTSVVTELSDPFSSAHMKTVGFEPAGAADLSSTFASHDDDDRATQGSISTDNDVDDEESESKRRRTDGYFVETNLSSRAVREPRVVIQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASNNLKCVLTTYEGRHNHEVPAARSSNQISSICDTTHPNNAQPAISQADGVSKAETKVHFDRKSEFNNAYTRPGCLGNFSTDMKLGTSSIYPLKIPFLQNHISYGSFGLDPKYTTTSHSSCITSIVPDFPISLPLNPNLSAPGLNLSTGRTLGPVQTLVGRSQLKDDEVGFMKPKQEEKDDKLSHVSMAALDNGNLSSLWSSPSVYQCRGNNHFP 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 45596473 45600200 - Bda003267.1 Bda01g01087 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01087 630 MobiDBLite consensus disorder prediction 218 252 - -
Bda01g01087 630 SUPERFAMILY WRKY DNA-binding domain 370 436 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 SUPERFAMILY WRKY DNA-binding domain 165 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 Gene3D WRKY domain 363 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 MobiDBLite consensus disorder prediction 311 347 - -
Bda01g01087 630 Pfam WRKY DNA -binding domain 377 434 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 Pfam WRKY DNA -binding domain 168 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 567 IPR044810 GO:0003700
Bda01g01087 630 MobiDBLite consensus disorder prediction 138 161 - -
Bda01g01087 630 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 1 567 - -
Bda01g01087 630 Gene3D WRKY domain 161 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 ProSiteProfiles WRKY domain profile. 168 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 ProSiteProfiles WRKY domain profile. 371 436 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 SMART WRKY_cls 376 435 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda01g01087 630 SMART WRKY_cls 166 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01087 Bda-Chr1:45596473 Bda09g01561 Bda-Chr9:47169033 7.35E-77 dispersed
Bda01g01087 Bda-Chr1:45596473 Bda12g00951 Bda-Chr12:40590110 1.53E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15416 PF03106 WRKY 7.20E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01087 K18835 - zju:107412508 633.639