Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01103 | ATGGCGTCTTCGTCTAATTCCCCTTGTGCAGCCTGCAAGTTTCTCCGCCGGAAATGTCAACCGGAGTGCGTTTTCGCGCCGTACTTTCCACCAGACCAACCCCAAAAGTTCGCCAACGTCCACAAGGTGTTCGGCGCAAGCAACGTCACCAAGCTCCTCAACGAGCTCCATCCTCACCAGCGAGAAGACGCCGTCAACTCCCTTGCCTACGAGGCCGATATGCGTCTCAGAGATCCAGTCTATGGGTGCGTCGGCGTCATCTCCCTCCTCCAGCACCAGCTTCGCCAGCTTCAGATTGACCTCAGCTGCGCAAAATCTGAGCTTTCAAAATACCAAAACCTGGGTCTCGCCGGCCATGGCCTCATCGCAGCCGCCGCTGCCGCTGCCACTACGACTCATAACCACCATCTCCAGAACCTCGGAATCAACCTGATTGGCTCCGGGAAAGATTACCACCACCACCACCAGTTATTCCCTCGCGATCAGGCCCAGCCGATCATGAGGGGCTTCGACATTGCCGGAAACAGTGTCTACGACGGCGGCCTCCTAGCAATGAACGTCTCCGCAAGTTTAGGTCAACTCAGCCAGTTTCAGCAACCGAGGGCTGCCGGAGGCGATGATCACCGCCGAACAATCGATCCTTCTTAG | 648 | 56.94 | MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQNLGLAGHGLIAAAAAAATTTHNHHLQNLGINLIGSGKDYHHHHQLFPRDQAQPIMRGFDIAGNSVYDGGLLAMNVSASLGQLSQFQQPRAAGGDDHRRTIDPS | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 45777636 | 45778283 | + | Bda003284.1 | Bda01g01103 | 1103 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01103 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 3 | 181 | - | - | |
Bda01g01103 | 215 | ProSiteProfiles | LOB domain profile. | 7 | 108 | IPR004883 | - | |
Bda01g01103 | 215 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 6-LIKE | 3 | 181 | - | - | |
Bda01g01103 | 215 | Pfam | Lateral organ boundaries (LOB) domain | 8 | 105 | IPR004883 | - | |
Bda01g01103 | 215 | Coils | Coil | 87 | 114 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01103 | Bda-Chr1:45777636 | Bda07g01123 | Bda-Chr7:13134567 | 1.45E-79 | dispersed | |
Bda01g00006 | Bda-Chr1:294688 | Bda01g01103 | Bda-Chr1:45777636 | 5.20E-21 | transposed | |
Bda11g01663 | Bda-Chr11:50732063 | Bda01g01103 | Bda-Chr1:45777636 | 4.44E-52 | transposed | |
Bda14g01169 | Bda-Chr14:11021002 | Bda01g01103 | Bda-Chr1:45777636 | 3.98E-51 | transposed | |
Bda15g00546 | Bda-Chr15:8519291 | Bda01g01103 | Bda-Chr1:45777636 | 8.00E-53 | transposed | |
Bda01g01103 | Bda-Chr1:45777636 | Bda13g01832 | Bda-Chr13:42352205 | 1.32E-148 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15417 | PF03195 | LOB | 4.10E-43 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01103 | - | - | rcu:8263444 | 342.428 |