Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01133 AGGTGGTACAGGGCTTGGATCAACTTCATACTGATATGGGCAGTTTACTCGTCTTTCTTTACACCAATGGAGTTCGGGTTCTTCAGAGGACTGCCTGAGAATCTCTTTATTCTTGACATTGCTGGACAGATTACCTTTTTGCTCGACATCGTTCTTCAGTTCTTTGTTGCTTACAGAGACACTCAGACCTATATTATTGTTCACAAACGTACCCATATTGCTCTCCGGTTCTTGAAATCTGGGTTTGTGATTGATCTTCTTGGATGCATGCCTTGGGACATCATCTACAAGGCTTGTGGGAGAAGAGAGGAAGTAAGGTATCTTTTATGGATCAGATTAAGTAGGGTGCGAAAAGTCACTGATTTCTTTCGGAATATGGAGAGGGACATACGTATAAACTACATGTTCACTAGGATTGTAAAGCTTATTGTTGTTGAGCTCTATTGCACACACACAGCTGCCTGCATCTTTTACTATTTGGCTACGACTCTTCCATCTTCTGAAGAAGGATACACCTGGATTGGAAGCTTACAGTTGGGAGACTACAGTTACTCAAATTTCAGAGATATTGATATATGGAAACGCTACACAACATCCTTATATTTTGCCATAGTAACCATGGCCACAGTTGGTTATGGGGATATACATGCAGTAAATATGAGGGAAATGATATTTATAATGATATATGTCTCTTTTGACATGATTCTTGGGGCCTATTTGATTGGTAACATGACAGCCTTAATTGTTAAAGGTTCAAAAACTGAAAAGTTCAGAGATAAAATGGCAGATCTCATCAAATACATGAATCGAAACAGGCTTGGAAGAGACATCCGTAATCAGATTAAAGGTCACGTACGTTTACAGTACGAGAGTAGCTACACCGAAGCTTCTGTTCTTCAGGACATCCCCGTTTCTATCCGCGCCAAGATTTCACAAACGTTATACTTGCCTTACATTGAGAATGTTTCTCTCTTCAGGGGATGCTCCACAGAGTTCATCAATCAAATAGTTTTAAGACTCCACGAAGAGTTTTTTCTCCCTGGAGAAGTGATAATGGAACAGCGAAATGCCGTAGATCAACTTTATTTTATCTGTCATGGTAAATTGGAGGAACTGGGCATAGGAGAAGATGGATCAGAGGAAACTATTTCAGTACTAGAACCCAACAACTCATTTGGGGAGATTTCTATTCTTTGCAATATTCCTCAACCCTATACAGTTCGCGTCAAGGAATTATGTCGGCTTCTGAGGCTCGACAAGCAGTCTTTTACGAATATTCTTGATATATACTTTTACGATGGCCGGAAAATCTTGAACAATCTTCTAGAGGGAAAAGAATCTAGTCTCCGAGTCAAGCAGTTGGAGTCAGATATTACATTTCACATTGGAAAGCAAGAAGCAGAACTTGCTTTAAAGGTGAATAGTGCAGCTTACCATGGAGATTTGTACCAGCTCAAAGGTTTGATCCGAGCAGGAGCCGATCCAAACAAGAAAGATTACGACGGAAGGTCACCATTGCACCTTGCAGCATCAAGAGGATATGAAGATATTGCACTTTTTCTCATTCAGGAAGGAGTAGACACCAACATAATAGATAAGTTTGGAACCACGCCCTTACTCGAAGCCATAAAAAACGGGCACGATCGAATTGCGGCTTTACTCGTCCAACGAGGTGCTTCTTTAAAGATAGAAGAAGCTGGGACCTTTCTTTGTGCAGCCGTTGCAAGGGGGGATTCTGATTTCCTTAAAAGAGTGTTGGCCAATGGAATAGATCCAAACTCAAAAGATTATGATTATCGAACTCCACTCCATGTGGCAGCTGCTGAAGGATTGTATCTGATGGCTAAGCTGCTGATAGAAGCTGGGGCCAGTGTCTTTTCAAAAGACAGATGGGGAAATACACCTCTAGATGAGGCCAGGACGGTTGGAAACATGAATTTGATCAAACTATTGGAAGAAGCGAAGGCCTTTCAGCTCTCTGCATCATCCCCTCATCCAACCCAAGAAGTCACTGGTAAGAAGCATTCAAGACAATGCACTGTGTTCCCTTTCCACCCTTGGGATCCTAAAGAAAATAGAAGATCCGGGATTGTGTTATGGGTTCCACAAACCATTCAAGAGCTAATCGAAGCAGCCGTCGAGCAGCTCGAACTTAAGAGCGGGACTTGTATATTAACAGAAGACGGAGGTAAAATTCTTGATGTTGGCATGATTAATGACGCCCAAAAGCTGTATCTAGTCAATGAAACAAAT 2253 41.59 RWYRAWINFILIWAVYSSFFTPMEFGFFRGLPENLFILDIAGQITFLLDIVLQFFVAYRDTQTYIIVHKRTHIALRFLKSGFVIDLLGCMPWDIIYKACGRREEVRYLLWIRLSRVRKVTDFFRNMERDIRINYMFTRIVKLIVVELYCTHTAACIFYYLATTLPSSEEGYTWIGSLQLGDYSYSNFRDIDIWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKMADLIKYMNRNRLGRDIRNQIKGHVRLQYESSYTEASVLQDIPVSIRAKISQTLYLPYIENVSLFRGCSTEFINQIVLRLHEEFFLPGEVIMEQRNAVDQLYFICHGKLEELGIGEDGSEETISVLEPNNSFGEISILCNIPQPYTVRVKELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGKESSLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLIRAGADPNKKDYDGRSPLHLAASRGYEDIALFLIQEGVDTNIIDKFGTTPLLEAIKNGHDRIAALLVQRGASLKIEEAGTFLCAAVARGDSDFLKRVLANGIDPNSKDYDYRTPLHVAAAEGLYLMAKLLIEAGASVFSKDRWGNTPLDEARTVGNMNLIKLLEEAKAFQLSASSPHPTQEVTGKKHSRQCTVFPFHPWDPKENRRSGIVLWVPQTIQELIEAAVEQLELKSGTCILTEDGGKILDVGMINDAQKLYLVNETN 751
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 46235114 46251657 - Bda032934 Bda01g01133 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01133 751 ProSiteProfiles Ankyrin repeat region circular profile. 598 630 - -
Bda01g01133 751 ProSiteProfiles cAMP/cGMP binding motif profile. 324 444 IPR000595 -
Bda01g01133 751 PANTHER POTASSIUM CHANNEL SKOR-LIKE 1 750 - -
Bda01g01133 751 SUPERFAMILY Ankyrin repeat 473 653 IPR036770 -
Bda01g01133 751 CDD CAP_ED 324 438 IPR000595 -
Bda01g01133 751 Gene3D - 5 250 - -
Bda01g01133 751 Gene3D - 566 661 IPR036770 -
Bda01g01133 751 Pfam Ion transport protein 4 249 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bda01g01133 751 PANTHER POTASSIUM CHANNEL AKT1 1 750 IPR045319 GO:0005249|GO:0006813
Bda01g01133 751 SUPERFAMILY Voltage-gated potassium channels 1 249 - -
Bda01g01133 751 ProSiteProfiles Ankyrin repeat region circular profile. 501 533 - -
Bda01g01133 751 Pfam KHA, dimerisation domain of potassium ion channel 678 746 IPR021789 -
Bda01g01133 751 Gene3D - 458 565 IPR036770 -
Bda01g01133 751 PRINTS EAG/ELK/ERG potassium channel family signature 240 249 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda01g01133 751 PRINTS EAG/ELK/ERG potassium channel family signature 196 213 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda01g01133 751 PRINTS EAG/ELK/ERG potassium channel family signature 39 49 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda01g01133 751 PRINTS EAG/ELK/ERG potassium channel family signature 148 158 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bda01g01133 751 Gene3D Helix hairpin bin 251 307 - -
Bda01g01133 751 SMART ANK_2a 598 627 IPR002110 GO:0005515
Bda01g01133 751 SMART ANK_2a 565 594 IPR002110 GO:0005515
Bda01g01133 751 SMART ANK_2a 534 563 IPR002110 GO:0005515
Bda01g01133 751 SMART ANK_2a 631 661 IPR002110 GO:0005515
Bda01g01133 751 SMART ANK_2a 501 530 IPR002110 GO:0005515
Bda01g01133 751 ProSiteProfiles Ankyrin repeat profile. 501 533 IPR002110 GO:0005515
Bda01g01133 751 Pfam Ankyrin repeats (3 copies) 571 652 IPR002110 GO:0005515
Bda01g01133 751 Pfam Ankyrin repeats (3 copies) 476 563 IPR002110 GO:0005515
Bda01g01133 751 Gene3D Jelly Rolls 308 446 IPR014710 -
Bda01g01133 751 SUPERFAMILY cAMP-binding domain-like 252 442 IPR018490 -
Bda01g01133 751 SMART cnmp_10 324 442 IPR000595 -
Bda01g01133 751 ProSiteProfiles Ankyrin repeat region circular profile. 534 565 - -
Bda01g01133 751 PRINTS Ankyrin repeat signature 502 517 IPR002110 GO:0005515
Bda01g01133 751 PRINTS Ankyrin repeat signature 614 628 IPR002110 GO:0005515
Bda01g01133 751 ProSiteProfiles Ankyrin repeat profile. 534 566 IPR002110 GO:0005515
Bda01g01133 751 Pfam Cyclic nucleotide-binding domain 344 428 IPR000595 -
Bda01g01133 751 ProSiteProfiles Ankyrin repeat profile. 598 630 IPR002110 GO:0005515
Bda01g01133 751 ProSiteProfiles KHA domain profile. 678 751 IPR021789 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01133 Bda-Chr1:46235114 Bda03g00048 Bda-Chr3:613252 2.65E-90 dispersed
Bda01g01133 Bda-Chr1:46235114 Bda09g01174 Bda-Chr9:42587681 3.41E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01133 K21867 - gmx:100797927 1281.54