Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01146 ATGGCGTCTAACCCTCTCGAAATCTGCGTCAAGGCCTCCGTCACTTTGCCCAATAAGCTCGGTGATTGTCCCTTCTGCCAAAGGGTACTGCTAACCTTGGAGGAAAAACATTTACCTTACGACATGAAGTTGGTAGATTTTACTAACAAGCCAGAATGGTTCCTAGAAATTAATGCAGATGGAAAAGTTCCCGTCATCAAACTCGAAGAAAAGCGGATTGCAGATTCAGATGTTATAACACAATTGCTCGAAGAGAAATACCCAAATCCACCATTGGCTACTCCACCTGCAAAGTCTTCAGTTGGGTCAAAGATCTTTTCCACCTTTATTGGTTTTCTCAAAAGCAAAGACTCCGCCGATGGAACAGAACAAGCTTTGCTAAGTGAGCTAAGTTCCTTCAATGATTATATCAAAGAGAATGGTCCTTTCATAAACGGCCAAGAGGTATCGGCTGCAGACTTGTCTCTCGGACCGAAGTTGTATCATCTCGAAATTGCATTATCACACTATAAGAATTGGTCGATTCCGGACACCATACCTTATGTGAAGTCTTACACGAAGGTATGTCTGGTGCAAAACAAACATTTAATTGACTGCAATATGTTTGGAATTTTCTTCCAAACACTTTGA 630 41.59 MASNPLEICVKASVTLPNKLGDCPFCQRVLLTLEEKHLPYDMKLVDFTNKPEWFLEINADGKVPVIKLEEKRIADSDVITQLLEEKYPNPPLATPPAKSSVGSKIFSTFIGFLKSKDSADGTEQALLSELSSFNDYIKENGPFINGQEVSAADLSLGPKLYHLEIALSHYKNWSIPDTIPYVKSYTKVCLVQNKHLIDCNMFGIFFQTL 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 46521257 46523147 - Bda003344.1 Bda01g01146 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01146 209 CDD GST_N_family 23 84 - -
Bda01g01146 209 Gene3D Glutaredoxin 5 92 - -
Bda01g01146 209 SUPERFAMILY GST C-terminal domain-like 86 189 IPR036282 -
Bda01g01146 209 SFLD Main (cytGST) 22 188 - -
Bda01g01146 209 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 190 IPR044627 GO:0033355|GO:0045174|GO:0098869
Bda01g01146 209 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 3 190 - -
Bda01g01146 209 Coils Coil 209 209 - -
Bda01g01146 209 SFLD Glutathione Transferase (cytosolic) 22 188 IPR040079 -
Bda01g01146 209 SUPERFAMILY Thioredoxin-like 21 90 IPR036249 -
Bda01g01146 209 Gene3D - 93 200 - -
Bda01g01146 209 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 91 IPR004045 -
Bda01g01146 209 Pfam Glutathione S-transferase, N-terminal domain 22 91 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01146 Bda-Chr1:46521257 Bda15g00369 Bda-Chr15:6550934 3.19E-70 dispersed
Bda01g01146 Bda-Chr1:46521257 Bda14g00316 Bda-Chr14:2141060 2.60E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01146 K21888 - csv:101203335 326.25