Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01171 | ATGCGGATGAGCTGCAATGGATGCAGAGTCCTGCGTAAAGGCTGCAGTGAGAATTGTAGTATTAGGCCTTGCTTGCAGTGGATCAAGAGCCATGATTCTCAGGCCAACGCTACTGTTTTCCTCGCCAAGTTCTATGGCCGTGCTGGCCTCATGAACCTCATCAACGCTGGCCCTGATCACCTCCGCCCTGCTATTTTTAGGTCTTTGTTGTACGAGGCGTGTGGGAGGATTGTTAACCCGATTTATGGATCCGTCGGCTTGCTGTGGTCCGGAAGCTGGCAACTCTGCCAGGACGCTGTTGAGGCCGTCCTGAAAGGAGCTCCGATCATTCCGATTACCTCTGAAGCAGCGGCTAACGGCCATGGACCGCCACTTAAGCCATACGACATCCGACACGTTGCGAAGGATGAGAACTCCATGGCGTCTGATCGACTCCGGCAAGTAAAGACTCGCACTCGTCACAATCGATCCGTCGGAAAGCCGAAGTCGAGCAAGAATTCTCCGATCGATTGCGTGGTCAATCCGGCTGGCGCTGTCTTATCCGATGCGATGAACAGGTCCACGAGTCACGAATCGTCGCTGAGTCAGCAGTCCGAGGCGCCGAACATTGAAAACGAGAGCAAGGAATCGGAGAGCATCGTCTCCATGGAGACTGCCGAGCCCTCGGCGCCGGTAATGATCCGATCAGAAACAGAATCCTTCCAGAAACGTAGGCACAAAGTAACAGAGGAAGTAGACATAGCCCTGGAGCTGACCTTAGGGCTGAAGCCGCCGCCGGTGTCACGTGCGGAGCAGGTGGTTCCTGTGAAGAAGCGAAAAGTCGACTCGAACAGTAGATCGCTCATCGGCGCCTGTAAGACAGAACTGGGCCTGGAATTTCCGGCATGA | 888 | 54.73 | MRMSCNGCRVLRKGCSENCSIRPCLQWIKSHDSQANATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQDAVEAVLKGAPIIPITSEAAANGHGPPLKPYDIRHVAKDENSMASDRLRQVKTRTRHNRSVGKPKSSKNSPIDCVVNPAGAVLSDAMNRSTSHESSLSQQSEAPNIENESKESESIVSMETAEPSAPVMIRSETESFQKRRHKVTEEVDIALELTLGLKPPPVSRAEQVVPVKKRKVDSNSRSLIGACKTELGLEFPA | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 46897207 | 46898177 | + | Bda003373.2 | Bda01g01171 | 1171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01171 | 295 | MobiDBLite | consensus disorder prediction | 184 | 223 | - | - | |
Bda01g01171 | 295 | MobiDBLite | consensus disorder prediction | 184 | 203 | - | - | |
Bda01g01171 | 295 | MobiDBLite | consensus disorder prediction | 136 | 171 | - | - | |
Bda01g01171 | 295 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 40 | 1 | 292 | - | - | |
Bda01g01171 | 295 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 292 | - | - | |
Bda01g01171 | 295 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 102 | IPR004883 | - | |
Bda01g01171 | 295 | PIRSF | AS2 | 1 | 293 | IPR017414 | - | |
Bda01g01171 | 295 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01171 | Bda-Chr1:46897207 | Bda11g01472 | Bda-Chr11:21231420 | 1.44E-54 | dispersed | |
Bda01g01171 | Bda-Chr1:46897207 | Bda13g01768 | Bda-Chr13:40996293 | 4.00E-159 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15425 | PF03195 | LOB | 1.90E-23 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01171 | - | - | zju:107416542 | 376.711 |