Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01172 ATGGCTAAGGTGGCATTAACACTAATAGCACTAAAAATCTTCACATTCTTATCTTTGCTGATCATAATTAAGACTGTTTATGAAACCATCTCGACCTACTGGTTGATCCCTCGACGAATCAAGAAGGCGATGGAGAAGCAAGGAGTGAGTGGACCAAAGCCACGCCCCCTCATCGGTAATATCTCGGACATTGCTTTACTTCTTTACAAATCCACCTCCAAACCCATGAACGCCATCGACCATGATATCGTTCCTCGCTTATTGCCTCACTACTTAGCCTGGTCCAAGCAATATGGAAAAAGATTTGTATACTGGAACGGGAGTGAGCCTAGAATGTGCATCACGGAGATAGAACTAATCAAACAGCTATTGGGGAAGAACAGTGCAGTTTCTGGAAAATCATGGCTTCAACAGCAAGGGTCCAAGCATTTTATTGGACGAGGGTTGTTGATGGCTAATGGCGAAGAATGGTATCACCAGCGACACATTCTCGCACCGGCCTTCACACGAGATAAGCTCAAAGGATATGGGGAGTTCATGGTGGAATGCACCATGAAGATGATTGAAACACTTGACAATCAAATCAAGCAGGGACAGACAGAGTTCGAGATTGGCGAGTATATGAGGAGTCTCACAGCTGATATCATTTCCCAGACGGAATTCGACAACAGCTCAGACAAGGGGAAGAAAATATTCCATTTGCTTAACCAGCTACAGAATCTATGTGCCCAAGCCAGCAGACACTTATACTTACCTGGAAGTCGATTTTTTCCTAGTAAATATAATAGAGAAATAAAATCATTGAAGAAGGAGGTGGAGAGATTACTGATGGAGATCATTCAAAGCAGAAAAGACTCTGTAGAAATTGGGAGGAGCCCTTGTTATGGAAAAGACTTACTGGGGATGTTGCTGAATGAGGCGCAGAAGAAGAACGGATTTCGCTTAAATTTGCAGCTCATCATGGATGAATGTAAAACATTCTTCTTTGCTGGCCATGAAACCACTTCCCTCTTACTCACATGGACTATTATGTTACTAGCCACGAACCCTTCTTGGCAGGAGAAAGTTCGCTCCGAGGTTAAGCAGGTCTTCGATGGAGAAAAGCCGGCCATTGATCATCTCTCCAAGCTCACCTTGTTAAGTATGGTCATAAATGAATCCCTAAGACTCTACCCACCAGCTACGGTTCTACCTAGAATGGCCTTGGAAGATATGAAACTAGGCGACCTATCCATACCCAAAGGGTTATCAATATGGATTCCAGTGCTAGCCATTCATCACAGTGAAGAACTATGGGGAGAAGATGCAAACAAGTTCAACCCTCAAAGATTTGCTTCCAAATCATCCTCTCCTGGTCGGTTTATTCCTTTTGCAGCTGGACCTAGAAACTGTATTGGCCAAGCCTTTGCTATCATGGAAGTGAAGATCATATTATCCATGCTCATTTCCAGGTTTAGCTTCACCATTTCCAATCATTATACCCATGCTCCTATTGTTATCCTCACGATTAAGCCTAAGTATGGAGTTCAAGTTCATTTGAAGCCGATAAACAGATGA 1557 43.16 MAKVALTLIALKIFTFLSLLIIIKTVYETISTYWLIPRRIKKAMEKQGVSGPKPRPLIGNISDIALLLYKSTSKPMNAIDHDIVPRLLPHYLAWSKQYGKRFVYWNGSEPRMCITEIELIKQLLGKNSAVSGKSWLQQQGSKHFIGRGLLMANGEEWYHQRHILAPAFTRDKLKGYGEFMVECTMKMIETLDNQIKQGQTEFEIGEYMRSLTADIISQTEFDNSSDKGKKIFHLLNQLQNLCAQASRHLYLPGSRFFPSKYNREIKSLKKEVERLLMEIIQSRKDSVEIGRSPCYGKDLLGMLLNEAQKKNGFRLNLQLIMDECKTFFFAGHETTSLLLTWTIMLLATNPSWQEKVRSEVKQVFDGEKPAIDHLSKLTLLSMVINESLRLYPPATVLPRMALEDMKLGDLSIPKGLSIWIPVLAIHHSEELWGEDANKFNPQRFASKSSSPGRFIPFAAGPRNCIGQAFAIMEVKIILSMLISRFSFTISNHYTHAPIVILTIKPKYGVQVHLKPINR 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 46899352 46901641 - Bda003374.1 Bda01g01172 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01172 518 Pfam Cytochrome P450 95 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 512 - -
Bda01g01172 518 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 512 - -
Bda01g01172 518 Gene3D Cytochrome P450 33 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 Coils Coil 265 285 - -
Bda01g01172 518 SUPERFAMILY Cytochrome P450 51 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bda01g01172 518 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01076 Bda-Chr1:45403356 Bda01g01172 Bda-Chr1:46899352 5.24E-45 dispersed
Bda01g01172 Bda-Chr1:46899352 Bda02g00461 Bda-Chr2:45385013 1.23E-118 dispersed
Bda13g01856 Bda-Chr13:42723619 Bda01g01172 Bda-Chr1:46899352 9.00E-36 dispersed
Bda15g00726 Bda-Chr15:10677084 Bda01g01172 Bda-Chr1:46899352 1.80E-99 dispersed
Bda03g01144 Bda-Chr3:12271584 Bda01g01172 Bda-Chr1:46899352 2.16E-101 transposed
Bda14g00200 Bda-Chr14:1399081 Bda01g01172 Bda-Chr1:46899352 3.64E-105 transposed
Bda14g00334 Bda-Chr14:2335454 Bda01g01172 Bda-Chr1:46899352 2.86E-11 transposed
Bda01g01172 Bda-Chr1:46899352 Bda12g00234 Bda-Chr12:2469603 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01172 K10717 - csin:114317518 793.112