Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01183 ATGTCGCCGGTTGATTCTTCACGTGAGGAGAATGTGTACATGGCGAAGTTGTCTGAACAGGCCGAACGCTATGAGGAAATGGTTGAGTTTATGGAGAAAGTTGCAAAGACTGTGGATGTCGATGAGCTGACTGTAGAAGAAAGAAATCTTCTATCTGTGGCTTATAAAAATGTGATTGGTGCTCGGAGGGCTTCATGGAGAATCATTTCTTCCATTGAGCAAAAGGAAGAGAGTAGGGGAAATGAGGATCACGTCACAATCATTAAGGAATATCGAGGAAAGATTGAAAATGAACTTAGCAAGATCTGTGATGGGATTTTGAGCCTTCTCGAGTCACATCTCATCCCATCTGCATCATCTGCCGAGTCTAAAGTTTTTTATCTCAAAATGAAGGGTGATTATCACAGGTATCTTGCCGAGTTTAAGACTGGGGCTGAGAGGAAGGAAGCTGCCGAAAGCACTTTGTTTGCTTACAAGTCTGCTCAGGACATTGCTCTCGCAAATCTAGCTCCTACTCATCCAATTAGGCTTGGACTTGCACTTAATTTTTCAGTATTTTATTATGAAATACTGAATTCACCAGATCGCGCTTGCAATCTTGCAAAGCAGGCTTTTGACGAGGCTATTGCTGAGTTGGATACGTTGGGTGAGGAGTCTTACAAGGATAGTACATTGATCATGCAACTTCTCCGTGACAATTTGACTCTGTGGACCTCTGATATTACGGATGATGCCGGAGATGAGATCAAGGAAGCATCAAAACGTGAATCAGGCGACGGACAGTAG 786 43.26 MSPVDSSREENVYMAKLSEQAERYEEMVEFMEKVAKTVDVDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTIIKEYRGKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLFAYKSAQDIALANLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEASKRESGDGQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 47114550 47117492 - Bda003389.1 Bda01g01183 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01183 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Bda01g01183 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Bda01g01183 261 Gene3D - 2 251 IPR036815 -
Bda01g01183 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bda01g01183 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Bda01g01183 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bda01g01183 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bda01g01183 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Bda01g01183 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Bda01g01183 261 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
Bda01g01183 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bda01g01183 261 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Bda01g01183 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Bda01g01183 261 Coils Coil 14 34 - -
Bda01g01183 261 PIRSF 2014/3/3 3 250 IPR000308 -
Bda01g01183 261 SMART 1433_4 8 251 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01183 Bda-Chr1:47114550 Bda13g01393 Bda-Chr13:36620851 1.63E-162 dispersed
Bda07g01078 Bda-Chr7:12622014 Bda01g01183 Bda-Chr1:47114550 1.75E-133 transposed
Bda01g01183 Bda-Chr1:47114550 Bda13g01729 Bda-Chr13:40605875 6.84E-136 wgd
Bda01g01183 Bda-Chr1:47114550 Bda13g01756 Bda-Chr13:40903858 8.35E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01183 K06630 - mnt:112092971 490.73