Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01224 GAGAAAGAGTTTAGCTTTCTTTTAGAGAGCTTGGGGAAGATAGCAATGGAGTTTCTGTTCAGAAAGTTGCCGCCGACAATGGTGGCGATTGCGGTGGCTTTGTGTGTTTTAGGGATAATGGTGCCAGAAGTTTCAGGCACTCGGTGGATTGTAGGGAGTAACATGGGCTGGACCAACGGTGTTAACTACACTATTTGGGCTCAAGATAAGCACTTCTACAATGGCGACTGGCTCTTCTTTGTTTACGACCGGAATCAAAATAACGTTCTCGAGGTGAACAAAACGGACTACGAGTTATGCAATTCCGATAACCCGATCCACAGCTGGACAACCGGCGCCGGAAGAGACGTCGTCCCGCTCAACGTGACGAGGCCCTACTATTTCATCAGCGGCAAAGGTTTCTGCTTTGGAGGCATGAAGCTGGCTATTAATGTTGAGAATTTACCTCCTCCTCCCTCATCTTTGCCACTAGGTGAGAAGAGCTCTGCTCCAACACTAACTTACGGATTGACCCGTCTTGTTCTTCCGGTGGCTTTAGCCGTCGGAGTCGTCTGGGAAGCTCTTTCCCGGCTCTGA 576 49.48 EKEFSFLLESLGKIAMEFLFRKLPPTMVAIAVALCVLGIMVPEVSGTRWIVGSNMGWTNGVNYTIWAQDKHFYNGDWLFFVYDRNQNNVLEVNKTDYELCNSDNPIHSWTTGAGRDVVPLNVTRPYYFISGKGFCFGGMKLAINVENLPPPPSSLPLGEKSSAPTLTYGLTRLVLPVALAVGVVWEALSRL 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 47609870 47611029 + Bda003438.1 Bda01g01224 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01224 191 Pfam Plastocyanin-like domain 57 138 IPR003245 GO:0009055
Bda01g01224 191 SUPERFAMILY Cupredoxins 46 145 IPR008972 -
Bda01g01224 191 PANTHER LAMIN-LIKE PROTEIN 27 182 - -
Bda01g01224 191 ProSiteProfiles Phytocyanin domain profile. 47 147 IPR003245 GO:0009055
Bda01g01224 191 PANTHER BLUE COPPER PROTEIN 27 182 IPR039391 GO:0009055
Bda01g01224 191 Gene3D - 46 148 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01224 Bda-Chr1:47609870 Bda09g00514 Bda-Chr9:6802308 7.04E-18 dispersed
Bda12g00563 Bda-Chr12:9658879 Bda01g01224 Bda-Chr1:47609870 1.28E-28 transposed
Bda01g01224 Bda-Chr1:47609870 Bda13g01701 Bda-Chr13:40376899 1.02E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01224 - - cit:102623851 244.973