Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01263 ATGGATCTAGAAAGTGTGATTAGAGGCCATTCAAACAAGAAAAATTCATGGACAACTGTCTTAACTTTAGCTTACCAGAGCTTGGGGGTTGTCTATGGCGATTTAAGTACTTCTCCGTTGTACGTTTACAAAAGCGCTTTTGCAGAGGATATCCATCACTCGGAGACAAACGAAGAGATCTATGGGGTTCTATCCTTTATATTCTGGACTCTGACTCTCATCCCCTTGCTTAAGTACGTCTTTATTGTGCTTAGAGCCGATGATAATGGAGAAGGGGGGACTTTTGCTCTGTACTCGTTGCTATGTCGCCATGCCCGACTGAGCTCGTTGCCCAATTGCCAGCTTGCCGATGAGGAGCTTTCTGAATACGGAAGAGAGGGGATTGATTCGAGCAAGAAAAGCGTTTCTGGGCAGACGCTGAAATCGATCTTGGAGAGGCATAAAGTTCTTCAAAGTATACTGCTCGTTCTAGCTTTGATTGGTACATGCATGGTTATTGGGGATGGAGTGCTCACACCTGCAATTTCTGTCTTCTCTGCTGTGTCAGGGCTGGAGCTTTCAATGGCTAAAGAGCACCATAGATATATTGAAGTTCCAATTGCATGTGTGATATTGGTGTTCTTATTTTCCCTCCAACATTACGGCACTCACCGAATCGGATTCCTCTTCGCCCCGGTTGTAATTGCGTGGCTTTTATGCATCAGTGCTATAGGAATATACAATATATTCCATTGGAATCCTTATGTTTACCAAGCAATTTCTCCTTACTACATGTACAAATTTCTGAAGAAGACTCAGGGGAAAGGGTGGATGGCTTTGGGAGGAATTCTACTTTGCATTACAGGGTCAGAAGCTATGTTTGCTGATCTTGGCCACTTTTCACAGTTTTCCATCCAGATTGCTTTCACTTTTATGGTCTATCCATCGCTCATACTTGCATATATGGGACAAGCTGCTTATCTCTCCAAGCACCACCTTCTTGAAAGTAACTATCATATTGGATTCTATGTGTCTGTCCCTGAGAAAATAAGATGGCCTGTACTTGGAATAGCCATTCTAGCAGCTGTGGTAGGAAGCCAGGCCATCATCACTGGAACTTTTTCAATAATCAAACAGTGCTCTTCTCTGGGTTGCTTTCCAAGAGTCAAAATTGTCCACACTTCATCTACGGTTCACGGTCAGATTTACATTCCTGAGATCAACTGGACTTTAATGATATTATGTTTAGCTGTTACGGTCGGCTTTCGAGACACGAAACGGATGGGCAATGCATCGGGTTTGGCTGTAATAACTGTGATGCTCGTTACGACCTGCCTCATGTCCGTGGTAATCGTGTTATGCTGGCACAAGAGTATATACCTCGCCATTGCCTTCCTTCTGTTCTTCGGCTCTGTCGAAGCCCTCTACTTTTCTGCGTCTGTAATCAAATTTCTCCAAGGAGCTTGGGTCCCCGTCGCCCTATCCTTCTTCTTCCTCATCGTAATGTACGTTTGGCACTACGGAACGCTGAAAAAGTATGAATTTGATGTTCAGAATAAGGTCTCCATCAATTGGCTCCTCGGTTTGGGTCCGAATCTGGGTATTGTTAGGGTTCGAGGAATTGGCCTTATTCATACCGAGCTAGTCTCTGGAATACCTGCGATTTTCTCTCACTTTGTCACAAACCTCCCGGCTTTTCACCAGGTCGTCGTCTTTCTCTGCATCAAATCTGTTCCGGTTCCTCACGTTAGACCGGAGGAGAGGTTTCTCGTCGGAAGAGTCGGCCCTAAAGGATACCGGATTTACAGAAGCATAGCGAGGTACGGTTATCACGACGTTCACAAAGACGATATGGAGTTCGAAAAAGACCTGATTTGCAGCATCGTCGAATTCATTCGATCGGAGAGACAGGAATCCATCGCCGGACCGGGAGAAACGGAAGAGGACGAAAGAATGACAGTGGTGGGAACATGCTCGTCGAACTCCGACGGGATAAGATTGTGGGAGGACGAGAGCGAAAGTTCAAGAGCGCAGACGAAGAAGAAAGGGAAGAAGAAAAGGGTGAGGTTCGTGGTGCCTGAGAGTGCGAGAATAGAGATGGAAGCGCGGAGGGAGGTGGAGGAGGTGGTGGCGGCGAGGGAGGGAGGAATGGCGTTCATAATGGGGCACTCCTACGTCAGAGCAAAGAGAGGTTCTGGGTTGATGAAGAAGATAGCGATAAACTACGGGTATGATTTCTTGAGGAGGAATTCGAGAGGCCATTGTTATGTCCTCGGCATTCCTCATGCATCCACCTTAGAAGTTGGAATGGTTTATCATGTTTGA 2304 46.05 MDLESVIRGHSNKKNSWTTVLTLAYQSLGVVYGDLSTSPLYVYKSAFAEDIHHSETNEEIYGVLSFIFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARLSSLPNCQLADEELSEYGREGIDSSKKSVSGQTLKSILERHKVLQSILLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMAKEHHRYIEVPIACVILVFLFSLQHYGTHRIGFLFAPVVIAWLLCISAIGIYNIFHWNPYVYQAISPYYMYKFLKKTQGKGWMALGGILLCITGSEAMFADLGHFSQFSIQIAFTFMVYPSLILAYMGQAAYLSKHHLLESNYHIGFYVSVPEKIRWPVLGIAILAAVVGSQAIITGTFSIIKQCSSLGCFPRVKIVHTSSTVHGQIYIPEINWTLMILCLAVTVGFRDTKRMGNASGLAVITVMLVTTCLMSVVIVLCWHKSIYLAIAFLLFFGSVEALYFSASVIKFLQGAWVPVALSFFFLIVMYVWHYGTLKKYEFDVQNKVSINWLLGLGPNLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPEERFLVGRVGPKGYRIYRSIARYGYHDVHKDDMEFEKDLICSIVEFIRSERQESIAGPGETEEDERMTVVGTCSSNSDGIRLWEDESESSRAQTKKKGKKKRVRFVVPESARIEMEARREVEEVVAAREGGMAFIMGHSYVRAKRGSGLMKKIAINYGYDFLRRNSRGHCYVLGIPHASTLEVGMVYHV 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48076958 48081098 - Bda003491.1 Bda01g01263 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01263 767 TIGRFAM kup: potassium uptake protein 23 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bda01g01263 767 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bda01g01263 767 PANTHER POTASSIUM TRANSPORTER 6 1 767 - -
Bda01g01263 767 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 767 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01212 Bda-Chr1:47476838 Bda01g01263 Bda-Chr1:48076958 0 dispersed
Bda01g01263 Bda-Chr1:48076958 Bda11g01258 Bda-Chr11:13195711 0 dispersed
Bda11g01259 Bda-Chr11:13205261 Bda01g01263 Bda-Chr1:48076958 0 dispersed
Bda01g01263 Bda-Chr1:48076958 Bda14g00189 Bda-Chr14:1350416 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01263 K03549 - mnt:21391780 1282.32