Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01271 ATGAAGAAAAGTGAAAGTGGAGGTGGGTATGTGAGGGCAGATCAAATAGGTCTGAAAAGCTTGGACGAGCAACTGCAGAGGCATTTGAACCTAGCATGGACCATGGAGATAAAAAAAGAGAAAGAAAAAGAAGGCGGAGCAAGGCCTACGGTCACTAGGCCAGAGTGGGAGATAAACCCATCTAAGCTAATTATCAAGGGCGTTATAGGTCGGGGAACTTTTGGAACAGTTCATCGTGGAATTTATGACGATCTTGATGTTGCTGGTACTATCACGCCTCACCGGGGACCCAAGACAGAATGGGGAACGACTAACCCGAAAATCGAGTCAAATCGTCCAACCCTTGATTTTATTACTAAAAAATGCATCGTTTGGGGTGAGTCGACTAAACTCAATAAGAGTAAATTCATTGGTGCAACAATGGGAAGTTCTTCGGAGTTGCACATAAAAACAGATAATGGCCAGATTGGGTTGCCAAGCAATGTGCGTTGTGTTGTTGTTGAATACTGTCCTCGAGGTGCACTCAAAACTTACCTTATAAAGAACCGCCGAAAAAAACTGGCCTTTAAAGTAGTAGTTCATCTTGCACTGGACTTGGCAAGAGGGTTGGTTATTCGATTTGCATTTCTTTGTTTGAAGCTTCTACTTTTTTTCCTTCTCGAACATTTGTTAATTTCAATTTGCAGATTGAGTTATCTTCATTCAAAAAAGATTGTCCACAGACAGGTTCTGAATGGTAATCCATATAATGGGAAATGCGATGTGTACAGTTTTGGTATTCTACGACAGAATCTGAGACCCGAGATTCCCCGTTGTTGCCCAAGCTCTTTCGCAATTGTAATGAAGCGATGTTGGGATGCTAACCCAGATAAGCGGCCCGACATGGACGAGGCAGTGGCAATGCTGGAAGCGATTGACACGACTAAAGGTGGAGGCATGAATCCTCATGATCAACTACAAGGCTGTTTATGTTTTCGACTGTATCGAGGGCCTTGA 996 43.27 MKKSESGGGYVRADQIGLKSLDEQLQRHLNLAWTMEIKKEKEKEGGARPTVTRPEWEINPSKLIIKGVIGRGTFGTVHRGIYDDLDVAGTITPHRGPKTEWGTTNPKIESNRPTLDFITKKCIVWGESTKLNKSKFIGATMGSSSELHIKTDNGQIGLPSNVRCVVVEYCPRGALKTYLIKNRRKKLAFKVVVHLALDLARGLVIRFAFLCLKLLLFFLLEHLLISICRLSYLHSKKIVHRQVLNGNPYNGKCDVYSFGILRQNLRPEIPRCCPSSFAIVMKRCWDANPDKRPDMDEAVAMLEAIDTTKGGGMNPHDQLQGCLCFRLYRGP 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48131650 48141578 - Bda003499.1 Bda01g01271 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01271 331 Gene3D Phosphorylase Kinase; domain 1 50 145 - -
Bda01g01271 331 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 204 - -
Bda01g01271 331 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 260 325 - -
Bda01g01271 331 Gene3D Transferase(Phosphotransferase) domain 1 148 243 - -
Bda01g01271 331 ProSiteProfiles Protein kinase domain profile. 63 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01271 331 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 204 - -
Bda01g01271 331 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 260 325 - -
Bda01g01271 331 Pfam Protein tyrosine and serine/threonine kinase 247 301 IPR001245 GO:0004672|GO:0006468
Bda01g01271 331 SUPERFAMILY Protein kinase-like (PK-like) 49 204 IPR011009 -
Bda01g01271 331 SUPERFAMILY Protein kinase-like (PK-like) 228 300 IPR011009 -
Bda01g01271 331 Gene3D Transferase(Phosphotransferase) domain 1 244 317 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01271 Bda13g01658 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01271 Bda-Chr1:48131650 Bda04g00544 Bda-Chr4:54136935 2.91E-82 dispersed
Bda09g00796 Bda-Chr9:15116171 Bda01g01271 Bda-Chr1:48131650 1.42E-47 transposed
Bda01g01271 Bda-Chr1:48131650 Bda13g01658 Bda-Chr13:40027030 1.75E-136 wgd
Bda01g01271 Bda-Chr1:48131650 Bda06g00589 Bda-Chr6:8123710 1.34E-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69439 PF07714 PK_Tyr_Ser-Thr 2.30E-05 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01271 - - csv:101212631 367.081