Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01279 ATGGAGGGTCCGTCAGAGAAAAGATTTCCAGTGAATGCAAAAGATTATAAATTGTACGAAGAAGTTGGTGAAGGTGTCAGCGCCACTGTCTACAGGGCTATCTGCATGCCACTAAATGAGATTGTTGCTATTAAGGTTCTAGATTTGGAGAAGTGCAATAATGACCTGGATGGAATCCGGAGAGAGGTACAAACAATGACTTTGATTTCTCATACAAATGTATTACAAGCACATTGTTCTTTCACAAGTGGCCACAGCCTTTGGGTTGTGATGCCATACATGGCTGGAGGATCATGTCTTCATATAATGAAATCTGCCTATCCAGAAGGTTTCGAAGAGCCTGTTATAGCTACTGTGTTGCGTGAAGTTCTCAAAGCTCTTGTTTACCTTCACGCCCGTGGCCACATCCATAGGGATGTGAAGGCTGGGAATATATTAGTTGATTTTAATGGATCAGTCAAGCTGGCTGACTTTGGAGTGTCAGCTTGTATGTTTGATACTGGAGACAGACTAAGATCAAGAAATACTTTTGTTGGGACCCCTTGTTGGATGGCTCCCGAAGTTATGCAGCAGTTGCATGGATATGATTTTAAGGCAGACATCTGGTCACTGGGAATAACGGCTCTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCGCCAATGAAAGTTTTGCTAATGACTTTGCAAAATGCTCCTCCTGGTCTTGACTACGAAAGAGACAAGAGATTTTCCAAGTCTTTCAAGGAGATGGTGGCTTTATGCTTAGTAAAGGATCCGAAGAAACGTCCAACTTCGGAGAAGCTTCTAAAACATCCTTTTTTCAAACAGGGACGCCAAAATGAATATATAGCTCGCACCATTCTTGACGGCCTTGTCCCTTTAGGGGATCGGTTTAAGATGCTGAAGGCAAAAGAGTCCGATCTTCTTGTGCAGAACAAAGCGATGTATGAAGATAAAGAGCAATTATCACAGCAAGAGTACATTCGAGGAATTAGTGCATGGAACTTTAACCTGGAAGATTTAAAAAGTCAGGCTGCCCTGATTCAGGATGTTGATATTACAGAGGCAGAAGATTCAGATGTGAGGAAGATGCAGAGGGAGAAGAATGATTCTTCGGGATTGCATGTAAAGAGGTCATTCATTGAGCAAATGAAACATTTAAACCCCACACCTAGTCAGGAGGATGAGTTTACCGAACTTCATGATTTGACATGTTCGCTTGCTTCAATGCCAGCTAAGCCTCTTGAAGCACTCAGGCATGATGATATAAAAGCAAATAGTCCACGAGCTTTGGATCAAGAAAATGGTTCTGAGGATGATTGCTCTGGTCAAAATAGTTCATCGCGTTATGATGAGCATAAAAGGAACTTTACTGGCTCACTCCTTCCTGATAGAGCCATTTCTTCCAAAAAAGTTTCTGTTGATGGTGATAGGGATAATCCTCAATCAAAGTATTTATCAGAGCGGAACTATACTGGTTCATTGTTGTATCGCCAGAAAAGAGACATAAATAGCCATTCATCTGCTGAAGATTTGTCAGAAGGAGCAATAGTGCAACATAAGGGCCGGTTTAAAGTCACTTCAGCAGATCTTAGTCCTAAGGGTCCAACTCCAACATCAGTATTGTTAAATGCAGGTTCTGGGGTTATTCCTACAATCCCGAACTTGACAGCTGCTGCAGTTTCTCCATCACTACAGAGCATTTTGCAGCAGCACACGTTGCAAAGGGTTTGTGCAAATTCTAAATATATTTTTACAGTATAA 1773 41.79 MEGPSEKRFPVNAKDYKLYEEVGEGVSATVYRAICMPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLISHTNVLQAHCSFTSGHSLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATVLREVLKALVYLHARGHIHRDVKAGNILVDFNGSVKLADFGVSACMFDTGDRLRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSLGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVALCLVKDPKKRPTSEKLLKHPFFKQGRQNEYIARTILDGLVPLGDRFKMLKAKESDLLVQNKAMYEDKEQLSQQEYIRGISAWNFNLEDLKSQAALIQDVDITEAEDSDVRKMQREKNDSSGLHVKRSFIEQMKHLNPTPSQEDEFTELHDLTCSLASMPAKPLEALRHDDIKANSPRALDQENGSEDDCSGQNSSSRYDEHKRNFTGSLLPDRAISSKKVSVDGDRDNPQSKYLSERNYTGSLLYRQKRDINSHSSAEDLSEGAIVQHKGRFKVTSADLSPKGPTPTSVLLNAGSGVIPTIPNLTAAAVSPSLQSILQQHTLQRVCANSKYIFTV 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48193562 48198700 + Bda003507.1 Bda01g01279 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01279 590 MobiDBLite consensus disorder prediction 471 490 - -
Bda01g01279 590 Gene3D Transferase(Phosphotransferase) domain 1 97 329 - -
Bda01g01279 590 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01279 590 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 579 - -
Bda01g01279 590 MobiDBLite consensus disorder prediction 448 462 - -
Bda01g01279 590 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01279 590 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bda01g01279 590 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Bda01g01279 590 MobiDBLite consensus disorder prediction 431 465 - -
Bda01g01279 590 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01279 590 CDD STKc_OSR1_SPAK 14 277 - -
Bda01g01279 590 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 579 - -
Bda01g01279 590 SUPERFAMILY Protein kinase-like (PK-like) 13 324 IPR011009 -
Bda01g01279 590 MobiDBLite consensus disorder prediction 473 487 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01279 Bda13g01619 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01279 Bda-Chr1:48193562 Bda06g01211 Bda-Chr6:41982305 0 dispersed
Bda01g02122 Bda-Chr1:57248819 Bda01g01279 Bda-Chr1:48193562 1.42E-58 transposed
Bda04g00602 Bda-Chr4:54654699 Bda01g01279 Bda-Chr1:48193562 1.25E-12 transposed
Bda04g00785 Bda-Chr4:57781203 Bda01g01279 Bda-Chr1:48193562 0 transposed
Bda07g00318 Bda-Chr7:4226532 Bda01g01279 Bda-Chr1:48193562 2.92E-71 transposed
Bda01g01279 Bda-Chr1:48193562 Bda13g01619 Bda-Chr13:39677955 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69440 PF00069 Pkinase 1.90E-58 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01279 K08835 - csv:101205102 853.973