Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01289 ATGGCGGCAACCGAAGTGATCTCCTTGCGTTCTTTGATTTTCAATTTCAGAGATTCGAAGTTGATGTTTTTCTTCTTCTTCCTCATCTTCTTGCTTTTACTCTCTCCTTGTCTCTCCGATCCGCGAATCTCCGAATCAGGTCTGTTCTGCGGTAAAGATAGGACGAATATCACCATAATCCCAAGCTTCGTCAAGGAGATGGATGGCATTTCCCAGCTCATAACCAATCAGAGTTGGGCAACCCACTCTGTCAACTCCACTCCTCCTATTTTTGCCCTGGCTCAATGCTTCGAGGATCTCGTTCACACTGACTGCCTCCTCTGCTACGCCGCTAGCCGCACCAGACTCCCTAGATGCCTACCGGCTATGGCCGGTCGTTTATTTCTCGACGGTTGCTTCCTTCGCTACGATAATTACAGTTTCTACCACGAATCTACAGATTCTGTTAAGGATGCAGTGAATTGCACCTCCAGCTATGGGCAAATTGTTGATCAAAATGAAATTTCGAACTTTGTGAAGAATGTTGGATTCGTGGTTGGTAATGTAACGGAAGTCGCGCTCACAAATGGACATTTTGGAGTGAAGGAGGTGGATGGGGTTTATGCGTTAGCGCAGTGTTGGGAAACTCTAGATCGCGATGGATGCAGAGCTTGCTTGGAAAAGGCTGCTAGTGAGGTAAAAAATTGTACACCTAATAGGGAAGGGAGAGCGTTGAATGCTGGGTGCTATTTGAGGTATTCTACTGAGAATTTTTATGCTAAAGATGCAGAAGAAGATGAAAAAGAACTTCCATGGAAAGGGTTCAAAGTTACCATTGCTTTAGCTGCAGCTGCGTTTCTAATGCTGTCTTCTGCTGCTGCTTATGCAGCCTATAGAAGATATTCAAATGATAAAAAAGCCCTCATTAGCAAAATCAAAATTCCGATGTCCATTAACAAGTCGAGTTTATATTTTAAATATGAAACACTGGAAAAAGCAACAGATTATTTCAACCCTTCAAGAAAGATAGGCCAAGGAGGAGCTGGTTCTGTGTTTAAGGGGACTCTTCCTGATGGGAAAATTGTTGCTGTAAAGAGATTAGTATTCAATACTAGGCAATGGGTGGATGACTTCTTCAATGAAGTGAATTTGATCGGTGGAATCCAACACAAGAACCTTGTCAAGCTTTTGGGTTGCAGCATTGAAGGTCCTGAGAGTCTTCTAGTTTATGATTATGTCCCAAACAGGAGCCTCGATCAGTTCATTTTTGATAAGAACAAGGTTCAGATTCTAAATTGGAAGCAGAGATTGAACGTTATTGTGGGAACAGCCGAGGGTCTTGCTCATCTTCATGAAGGTTGTGGAGTGAGAATAATTCACAGGGACATAAAGAGCAGCAATATTCTTCTTGATGAGAATCTCAATCCCAAAATCGCAGACTTTGGCCTTGCTCGGTGTTTTTCAGCTGATATGACTCATCTCAGCACTGGAATTGCTGGAACGCTAGGTTACATGGCGCCTGAGTATCTTGTTCGAGGCCAACTCACCGAGAAAGCAGATGTTTATAGTTATGGAGTGTTGGTTCTTGAGATTGTTTGTGGAAAAAGAAATAATGCCTTCTTAGAGGAGACTGGCCCTCTCCTACTAAATGTTTGGAAACTGTATAAATCGAAGAGATTGGTAGAGGCTGTCGACTCGTGTCTGGGAGACGATTTCTCCGCAAAAGAAGCTGAAGATGTTCTTCAAATTGGTCTGTTGTGCACACAAGCTGCAGCTGGCTTGAGACCATCCATGGCTCAAATATTTGAATTGCTTATCAACAGGGAAAAGAAAATTGGTGAGCCAAGCCAACCTCCATTTCTGAATCCTAACATACCCGACCAAAGCTCAACCGTCAGATCTTACATCACCAAACTGGAATCTTCCTACCCTACCACGACAACCTCCAGTTCACCCAGTTCAGATGGACCTTCAAGAAGTGGAAACTCCTCAAGCAAGCAGTGA 1983 43.52 MAATEVISLRSLIFNFRDSKLMFFFFFLIFLLLLSPCLSDPRISESGLFCGKDRTNITIIPSFVKEMDGISQLITNQSWATHSVNSTPPIFALAQCFEDLVHTDCLLCYAASRTRLPRCLPAMAGRLFLDGCFLRYDNYSFYHESTDSVKDAVNCTSSYGQIVDQNEISNFVKNVGFVVGNVTEVALTNGHFGVKEVDGVYALAQCWETLDRDGCRACLEKAASEVKNCTPNREGRALNAGCYLRYSTENFYAKDAEEDEKELPWKGFKVTIALAAAAFLMLSSAAAYAAYRRYSNDKKALISKIKIPMSINKSSLYFKYETLEKATDYFNPSRKIGQGGAGSVFKGTLPDGKIVAVKRLVFNTRQWVDDFFNEVNLIGGIQHKNLVKLLGCSIEGPESLLVYDYVPNRSLDQFIFDKNKVQILNWKQRLNVIVGTAEGLAHLHEGCGVRIIHRDIKSSNILLDENLNPKIADFGLARCFSADMTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSYGVLVLEIVCGKRNNAFLEETGPLLLNVWKLYKSKRLVEAVDSCLGDDFSAKEAEDVLQIGLLCTQAAAGLRPSMAQIFELLINREKKIGEPSQPPFLNPNIPDQSSTVRSYITKLESSYPTTTTSSSPSSDGPSRSGNSSSKQ 660
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48337235 48339966 + Bda003520.1 Bda01g01289 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01289 660 ProSiteProfiles Gnk2-homologous domain profile. 150 251 IPR002902 -
Bda01g01289 660 SMART serkin_6 330 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01289 660 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
Bda01g01289 660 Pfam Protein kinase domain 332 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01289 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Bda01g01289 660 ProSiteProfiles Gnk2-homologous domain profile. 45 141 IPR002902 -
Bda01g01289 660 Gene3D - 65 141 IPR038408 -
Bda01g01289 660 Gene3D - 153 251 IPR038408 -
Bda01g01289 660 ProSiteProfiles Protein kinase domain profile. 330 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01289 660 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 30 642 - -
Bda01g01289 660 MobiDBLite consensus disorder prediction 634 660 - -
Bda01g01289 660 CDD STKc_IRAK 336 598 - -
Bda01g01289 660 SUPERFAMILY Protein kinase-like (PK-like) 307 598 IPR011009 -
Bda01g01289 660 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 642 - -
Bda01g01289 660 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Bda01g01289 660 Pfam Salt stress response/antifungal 83 139 IPR002902 -
Bda01g01289 660 Pfam Salt stress response/antifungal 166 248 IPR002902 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01289 Bda13g01627 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01289 Bda-Chr1:48337235 Bda01g02213 Bda-Chr1:57988957 7.70E-168 dispersed
Bda02g00166 Bda-Chr2:28647709 Bda01g01289 Bda-Chr1:48337235 1.24E-17 dispersed
Bda14g00806 Bda-Chr14:6205846 Bda01g01289 Bda-Chr1:48337235 1.76E-45 dispersed
Bda06g01120 Bda-Chr6:39869405 Bda01g01289 Bda-Chr1:48337235 5.87E-19 transposed
Bda09g00751 Bda-Chr9:13213789 Bda01g01289 Bda-Chr1:48337235 1.36E-19 transposed
Bda01g01289 Bda-Chr1:48337235 Bda13g01627 Bda-Chr13:39741485 2.06E-63 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69442 PF00069 Pkinase 1.30E-43 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01289 - - zju:107415491 808.905