Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01294 ATGTCCTTTGTAGGCACCCATGAGTATTTGGCTCCTGAAATAATCAAAGGAGAGGGCCATGGAAGTGCTGTGGATTGGTGGACTTTCGGGATCTTCCTCTACGAGCTTCTCTTCGGCGAAACTCCGTTCAAAGGGGCGGGAAATCGAGCTACTCTTTTTAATATTGTAGGGAAGCCATTGAGATTTCCCGACTCTCCTACGGTCAGTTTTGCGGCAAAGGATTTAATCAGAGGTTTACTTGATAAAGAGCCGCAGAACCGCTTCGCTTATCGACGTGGAGCAACTGAAATTAAACAGCATCCATTTTTTCAGACTGTCAATTGGGCTCTGATTCGATGTGCAACTCCGCCGGAGGTGCCCAGATCAGAGATTTTGCAGGTTCAGATAGTTGAAAAGGCTCCTGGAGTCGATGTAAAGCCTTCGGGTAATTATGTAGAGATCGATTTCTTTTGA 453 46.14 MSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGETPFKGAGNRATLFNIVGKPLRFPDSPTVSFAAKDLIRGLLDKEPQNRFAYRRGATEIKQHPFFQTVNWALIRCATPPEVPRSEILQVQIVEKAPGVDVKPSGNYVEIDFF 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48416010 48416462 + Bda003524.1 Bda01g01294 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01294 150 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01294 150 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 1 150 - -
Bda01g01294 150 PANTHER FLIPPASE KINASE 1-RELATED 1 150 - -
Bda01g01294 150 SMART serkin_6 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01294 150 Pfam Protein kinase domain 2 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01294 150 Gene3D Transferase(Phosphotransferase) domain 1 2 121 - -
Bda01g01294 150 SUPERFAMILY Protein kinase-like (PK-like) 2 128 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01294 Bda-Chr1:48416010 Bda01g00048 Bda-Chr1:6834613 9.54E-79 dispersed
Bda01g01294 Bda-Chr1:48416010 Bda13g01631 Bda-Chr13:39798999 2.45E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69443 PF00069 Pkinase 2.30E-21 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01294 K08286 - dcr:108218941 272.322