Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01303 ATGCCAAGCGTGTCTGTCAAGCTCTATAGCGTCTTCTTCAAATTCCTCTTGAAGCACCGTCTGCAGAATCGGATCCAAACCCCGCTCGACGAATCCAACCGCTTCGGAGTTACTTCCCGGCCGGAAGAAACTATTGCAGCGGCTAATCCCTCCTTTGCAGAAGGTGTTGCCACGAAAGACATTCACATAGACTCGCTAACGTCTGTGAGCATTCGGATCTTCCTTCCGGAGTCCGCTCTCTCACCGCCAGACTCCGATCCTAAGCTTCCTTTGAAATCTAGGGCGAAGATTACTACTAAAAGAGCTGATTCCAATACTCAATTTGATTCTGCTCTCCAAAGTCAGAGTAACCTTTCTCGGCGTTATAGCTATGGCCCTTCTGGAAATCTTGAGGAACCTCGGAGGAACAGTTACGGACATTATAGTAACGACATGGAGGGCCTGAATCTGATGTCAGCCGGTGGTGGTGGTGGACTTTACAGAGGCTATTCACCTTTGACGGACAACAGACGAAAATTGCCGATAATGTTGCAGTTTCACGGAGGGGGATGGGTCAGCGGGAGCAACGATTCTGTGGCGAATGATTCATTTTGTCGAAGAATTGCAAAATTGTGTGATGTAATTGTGGTGGCAGTCGGTTATAGGCTTGCTCCAGAGAATCGCTATCCAGCTGCTTTTGAAGACGGCTTAAAGGTCTTGAATTGGTTGGGAAAGCAGGCTAACTTGGCTGAGTGCACCATTTCACTGAGTTGTAATATTTTCCTAAACAGATGTGTTCTTCTTGGGGTAAGCTGTGGTGCAAATATTGCAGACTATGTAGCTAGGAAAGCTGTTGAAGGAGGAAAGCTTTTGGACCCGGTGAAAGTGGTTGCTCAGGTATTTATGTACCCATTCTTCATCGGGAGTGTCCCCACGCATTCTGAGTTAAAGCTTGCAAATTCCTACTTCTACGACAAAGCGATGTGCATACTTGCTTGGAAACTTTTTCTACCCGAAGAAGAGTTCAGTCTGGATCATCCAGCTGCTAATCCCCTCATTCCGGGAAGAGGTCCACCATTAAAGCTTATGCCCCCTACTCTCACTGTAGTGGCGGAACATGATTGGATGAGAGATAGAGCCATTGCTTACTCAGAAGAACTACGGAAGGTAAATGTAGATGCTCCGGTTCTAGAATATAAGGATGCAGTACATGAATTTGCAACCCTTGACATGCTTCTCAAGACACCTCAAGCTCTAGCCTGCGCGGAGGACATTGCCATTTGGGTCAAGAAATACATTTCACTCAGAGGACATGAGTTCTCTTATTGA 1308 46.71 MPSVSVKLYSVFFKFLLKHRLQNRIQTPLDESNRFGVTSRPEETIAAANPSFAEGVATKDIHIDSLTSVSIRIFLPESALSPPDSDPKLPLKSRAKITTKRADSNTQFDSALQSQSNLSRRYSYGPSGNLEEPRRNSYGHYSNDMEGLNLMSAGGGGGLYRGYSPLTDNRRKLPIMLQFHGGGWVSGSNDSVANDSFCRRIAKLCDVIVVAVGYRLAPENRYPAAFEDGLKVLNWLGKQANLAECTISLSCNIFLNRCVLLGVSCGANIADYVARKAVEGGKLLDPVKVVAQVFMYPFFIGSVPTHSELKLANSYFYDKAMCILAWKLFLPEEEFSLDHPAANPLIPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDMLLKTPQALACAEDIAIWVKKYISLRGHEFSY 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48473976 48476215 - Bda003532.1 Bda01g01303 1303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01303 435 MobiDBLite consensus disorder prediction 98 141 - -
Bda01g01303 435 SUPERFAMILY alpha/beta-Hydrolases 69 426 IPR029058 -
Bda01g01303 435 Gene3D alpha/beta hydrolase 17 429 IPR029058 -
Bda01g01303 435 PANTHER ARYLACETAMIDE DEACETYLASE 20 247 - -
Bda01g01303 435 PANTHER ARYLACETAMIDE DEACETYLASE 257 415 - -
Bda01g01303 435 Pfam alpha/beta hydrolase fold 176 400 IPR013094 GO:0016787
Bda01g01303 435 PANTHER CARBOXYLESTERASE 16-RELATED 20 247 - -
Bda01g01303 435 PANTHER CARBOXYLESTERASE 16-RELATED 257 415 - -
Bda01g01303 435 MobiDBLite consensus disorder prediction 100 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01303 Bda-Chr1:48473976 Bda04g00582 Bda-Chr4:54510769 1.74E-32 dispersed
Bda01g01303 Bda-Chr1:48473976 Bda08g01045 Bda-Chr8:21996320 1.68E-34 transposed
Bda01g01303 Bda-Chr1:48473976 Bda01g01699 Bda-Chr1:53030878 2.19E-34 transposed
Bda01g01303 Bda-Chr1:48473976 Bda12g00035 Bda-Chr12:215656 1.39E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01303 - - csv:101219102 669.077