Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01326 ATGGAGGATGAATCTTTTAGTGTTTTTGTAGACATGGTTGGTCAAAGCTCTATGATTGTTCTTCCTCATCTTTCTGTTCAAAACTCCATTGTTGATCCAACTTTATTAGACCTTAATGATCAGAATAATCTTGATCGTTTGGCGGTTGGGCTGCCTCTTCCTGTTATTTCATTTTCCAGTCTTCTTCTTCCTCCTCCTGGCTGTTTTCTTCGAGAAATTCCTGAAAGTTTGCCAGTTTCAGCCATACCATTCAACCCGTTTGATAGCTCTAGTACCTGTGTCTCCAATGGCGGCTCTAAAGCTTCAGATTCTTCTTTTTCAACTTCAGTGTATCGTGGGTGCGATGAAGCTGTTGATGATTTGAATTTTAAGTGGGAAAGCAACAATGGTCTCTCTTCTTTGCCGGTCGGATCTGGGTTTCCTCCTCATTCTTCTGTTAATCCGACACGATTTCCGGTAATGTGCTCTTCCAATGAAGCTCTTCCTTCTACTCAGATTCTAATGGGTTCCAGATATCTTTCTGCAATCCAAGAAATTCTCTTTCAAACTGCTGGTTATTCGCCGGAAAATTTTGACCAACTGGGGTTCTCCACTTCTGCCATTGGATCTACACCACATCCTTCTTCTTTCCTTTCCATCAAGGGAATTTCTCAGCCGGATCATGAGCTCATCACCCAATCAGAAACTCAATTTGATCCTGCATTGCTTAGAACAGCAGATTTGAAGAAAACCCATCTTTTAACTCTCCTCCAATTGGTTGATGATCGATTCAATCAATGCTTGGACGAGATTCATCCTGTTATATCCGCCTTCACATCAATTACTGAGTTGGATCCAACTTCACACACCCATGTTGCTCTGCAGACATTATCTTCTGTGTATAGGAATCTAAGGGAGAGAATCTGCAACTACGTCCTAGCCATGGAAGCTCATTCGAACCCATCATCATGCACCAAGGAGAAAGAAAGATCATTTGAGCTATCATTCTTCCAGAAACAGTGGGATATTCAGCAGCTGAAAAGAAAAGATCACCAGCTATGGAGGCCTCAGAGAGGCTTGCCGGAAAAATCAGTCTCCGTTCTACGCGCCTGGATGTTTCAGAATTTTCTCCATCCGTACCCTAAAGATGCAGAGAAGCATCTGCTTGCTGTAAAAAGTGGATTGACAAGAAGCCAGGTATCCAACTGGTTTATAAATGCTAGAGTCCGGTTATGGAAGCCGATGATCGAGGAAATGTATGCGGAGATGAACGGAAGAAAGCCGATCAATTGCTTAACCCAGTTGAGTATGAACCAGGACAGATTTGTTAAATTCTAG 1317 42.52 MEDESFSVFVDMVGQSSMIVLPHLSVQNSIVDPTLLDLNDQNNLDRLAVGLPLPVISFSSLLLPPPGCFLREIPESLPVSAIPFNPFDSSSTCVSNGGSKASDSSFSTSVYRGCDEAVDDLNFKWESNNGLSSLPVGSGFPPHSSVNPTRFPVMCSSNEALPSTQILMGSRYLSAIQEILFQTAGYSPENFDQLGFSTSAIGSTPHPSSFLSIKGISQPDHELITQSETQFDPALLRTADLKKTHLLTLLQLVDDRFNQCLDEIHPVISAFTSITELDPTSHTHVALQTLSSVYRNLRERICNYVLAMEAHSNPSSCTKEKERSFELSFFQKQWDIQQLKRKDHQLWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNGRKPINCLTQLSMNQDRFVKF 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48863701 48865387 - Bda003561.2 Bda01g01326 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01326 438 SMART HOX_1 347 411 IPR001356 GO:0003677
Bda01g01326 438 CDD homeodomain 347 408 IPR001356 GO:0003677
Bda01g01326 438 Gene3D - 341 420 - -
Bda01g01326 438 ProSiteProfiles 'Homeobox' domain profile. 344 407 IPR001356 GO:0003677
Bda01g01326 438 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 151 423 - -
Bda01g01326 438 SUPERFAMILY Homeodomain-like 348 416 IPR009057 -
Bda01g01326 438 Pfam Associated with HOX 166 301 IPR006563 -
Bda01g01326 438 Pfam Homeobox KN domain 364 403 IPR008422 GO:0003677|GO:0006355
Bda01g01326 438 SMART prehox3 161 303 IPR006563 -
Bda01g01326 438 PANTHER HOMEOBOX PROTEIN ATH1 151 423 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01326 Bda13g01607 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01326 Bda-Chr1:48863701 Bda05g01130 Bda-Chr5:59513484 3.93E-49 dispersed
Bda01g01326 Bda-Chr1:48863701 Bda13g01607 Bda-Chr13:39601813 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15439 PF07526 POX 4.70E-22 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01326 - - jre:109021085 338.191