Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01328 ATGACTACCTCCACTTGTGGAGGCTCAGACTTGGAACTCTGCCGAGATGACTCGGCTGCTTTCACTCTCAAAGTCATAGCCATGGCTTCCATCCTCATTGCCGGAGTTGCCGGGATAGCCATACCACTCGGCGGAAGACACCGAAATTTCCTTAAGGCAGACAGTAATCTCTTCGTCGCTGCAAAAGCCTTTGCTGCTGGTGTGATCCTCTCGACTGGATTCGTCCACATGCTCTCTGGTGGGTCGGAGGCTCTGTCCAGCCCTTGTTTGCCCACATTTCCTTGGTCCAAGTTTCCATTTCCTGGGTTCTTTGCCATGATTGCAGCTCTTGTGACCCTTTTGGTCGATTTTGTCGGGACTCAGTATTACGAGGGAAAGCAGGGGTTGAATCGTTCATACGAGGAGCAGAGTCAGGTTGGAGCATTAGAGGCAGGGCTTCAACAGGAAATTGTTCCAGCCATGGAGGCTAAGGAATGCAATGAGAAAGTGTTTGGGGAAGAAGAAGGTGGTGGAATGCATATTGTTGGAATGCATGCTCATGCAGCACATCATCGACATAGCCATCCGCACGGGAAAGAGGCTTGCGAGGGGAACTTGAGAATGCAACGTTCTCATAATCACGATCATGGACATGGTCACGATCATGGACATGGACATTCTCATGGGATTCAAAACAGCGATGAGGAGAGCAATGTTCGACATGTTGTGGTTTCTCAGATTTTGGAACTTGGGATTGTATCACATTCCGTGATCATCGGCCTATCTCTCGGAGTTTCTCAAAGTCCATGCACCATAAGACCGCTAATTGCAGCACTGTCCTTCCACCAGTTCTTCGAAGGATTTGCGCTAGGTGGATGCATCTCCCAAGCGCAATTCAACCCGAAATCAGCCATGATCATGGCCTGCTTTTTTGCCATCACGACCCCGATCGGGATTGGAGCGGGGACCACAGTGGCATCGTTCTACAATCCTCTGAGCGCAGGAGCTTTGGTTGCGGAAGGGATATTGGACTCTCTTTCTGCTGGGATTCTGGTTTACATGGCCTTGGTGGATCTCATTGCAGCTGATTTTCTGAGTAAGAGAATGAGCTGCAATTTTAGGCTGCAAGTAGTGTCTTATTTCATGCTTTTCCTTGGGGCTGGATTGATGTCTCTGCTGGCTATTTGGGCCTGA 1173 49.62 MTTSTCGGSDLELCRDDSAAFTLKVIAMASILIAGVAGIAIPLGGRHRNFLKADSNLFVAAKAFAAGVILSTGFVHMLSGGSEALSSPCLPTFPWSKFPFPGFFAMIAALVTLLVDFVGTQYYEGKQGLNRSYEEQSQVGALEAGLQQEIVPAMEAKECNEKVFGEEEGGGMHIVGMHAHAAHHRHSHPHGKEACEGNLRMQRSHNHDHGHGHDHGHGHSHGIQNSDEESNVRHVVVSQILELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNPKSAMIMACFFAITTPIGIGAGTTVASFYNPLSAGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQVVSYFMLFLGAGLMSLLAIWA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 48894238 48895889 - Bda003564.1 Bda01g01328 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01328 390 Pfam ZIP Zinc transporter 21 387 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bda01g01328 390 MobiDBLite consensus disorder prediction 203 229 - -
Bda01g01328 390 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 390 - -
Bda01g01328 390 MobiDBLite consensus disorder prediction 203 228 - -
Bda01g01328 390 PANTHER ZINC/IRON TRANSPORTER 1 390 - -
Bda01g01328 390 TIGRFAM zip: ZIP zinc/iron transport family 8 390 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01328 Bda-Chr1:48894238 Bda09g00576 Bda-Chr9:8064813 6.85E-99 dispersed
Bda11g01455 Bda-Chr11:20365936 Bda01g01328 Bda-Chr1:48894238 8.88E-13 transposed
Bda01g01328 Bda-Chr1:48894238 Bda13g01602 Bda-Chr13:39575469 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01328 K14709 - pvy:116142521 583.563