Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01335 | ATGTCCCCCTTTGGGGGTCTACATCGTTGTGCGGAAGAAGACCCGAGATGGAAGATGCCTTGGCTACTGTTCCTTGTTTCTTTGAAGTTCCTATTCAGATGCTTTCCGATGACTGGGCTGTGGATGGTCCGAAAAAAGCACATATCTCATCAAACGGTTCATTTTCTCGGAGTCTATGACGGCCACGGTGGTTTCCAGGTTGCTAACTACTGTCAGGAGCGACTTCACTTGGCTTTAGCCGAGGAGATTGAATTAGTCAAGGAAGGTTTATTAGCTGGAAGCACTACTGATAATTGCCAAGCTCAGTGGAAAAGAGCATTTACCAATTGTTTTCTTAAGGTTGATGCTGAAGTTGGAGGAAAATCTAGAACCGAGCCTGTGGCCTCGGAAACTGTCGGTTCAACTGCTGTCACTGCAATAATTTGTGCGTCTCATATTATAGTAGCTAATTGTGGAGATTCAAGAGCTGTGCTGTGTCGTGGGAAAGAGCCGAAGGCCTTGTCAGTGGACCATAAACCTAATAGAGAAGATGAATATGCAAGAATCGAGGCTGCCGGAGGAAAGGTCATTCAATGGAATGGGCACCGTGTTTTTGGTGTCCTTGCAATGTCAAGGTCTATCGGCGATAGATACTTGAAACCGTGGATCATTCCGGAGCCCGAAGTGACGTTTCTTCCTCGAGCTCGAGACGATGAATGTCTAATTCTCGCGAGTGATGGTTTGTGGGATGTAATGTCCAACGAAGAGGCATGTGACTTGGCTCGAAGAAGAATTCTCCTCTGGCACAAAAAGAATGCCTCCCTTAATCTAACCCACGAAAGGGACGGAGGAATCGACCCTGCAGCCCAAGCGGCAGCCGAGTATCTATGCAACAGAGCTCTTCAGAAGGGTAGTAAAGACAACATTACTGTGATCGTAGTGGACTTGAAAGCTCAGAGGAAGTTCAAGACAAAAACATGA | 960 | 46.77 | MSPFGGLHRCAEEDPRWKMPWLLFLVSLKFLFRCFPMTGLWMVRKKHISHQTVHFLGVYDGHGGFQVANYCQERLHLALAEEIELVKEGLLAGSTTDNCQAQWKRAFTNCFLKVDAEVGGKSRTEPVASETVGSTAVTAIICASHIIVANCGDSRAVLCRGKEPKALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRARDDECLILASDGLWDVMSNEEACDLARRRILLWHKKNASLNLTHERDGGIDPAAQAAAEYLCNRALQKGSKDNITVIVVDLKAQRKFKTKT | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 49031016 | 49032770 | - | Bda003571.1 | Bda01g01335 | 1335 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01335 | 319 | PANTHER | PROTEIN PHOSPHATASE 2C 6-RELATED | 40 | 319 | - | - | |
Bda01g01335 | 319 | Pfam | Protein phosphatase 2C | 49 | 302 | IPR001932 | - | |
Bda01g01335 | 319 | Gene3D | - | 36 | 319 | IPR036457 | - | |
Bda01g01335 | 319 | ProSitePatterns | PPM-type phosphatase domain signature. | 55 | 63 | IPR000222 | GO:0043169 | |
Bda01g01335 | 319 | CDD | PP2Cc | 50 | 309 | IPR001932 | - | |
Bda01g01335 | 319 | SMART | PP2C_4 | 23 | 307 | IPR001932 | - | |
Bda01g01335 | 319 | ProSiteProfiles | PPM-type phosphatase domain profile. | 37 | 309 | IPR001932 | - | |
Bda01g01335 | 319 | PANTHER | ALPHABET, ISOFORM E-RELATED | 40 | 319 | - | - | |
Bda01g01335 | 319 | SUPERFAMILY | PP2C-like | 48 | 310 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01335 | Bda-Chr1:49031016 | Bda03g00136 | Bda-Chr3:1182055 | 3.60E-157 | dispersed | |
Bda01g01335 | Bda-Chr1:49031016 | Bda01g01341 | Bda-Chr1:49109190 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01335 | K14497 | - | zju:107420119 | 480.33 |