Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01335 ATGTCCCCCTTTGGGGGTCTACATCGTTGTGCGGAAGAAGACCCGAGATGGAAGATGCCTTGGCTACTGTTCCTTGTTTCTTTGAAGTTCCTATTCAGATGCTTTCCGATGACTGGGCTGTGGATGGTCCGAAAAAAGCACATATCTCATCAAACGGTTCATTTTCTCGGAGTCTATGACGGCCACGGTGGTTTCCAGGTTGCTAACTACTGTCAGGAGCGACTTCACTTGGCTTTAGCCGAGGAGATTGAATTAGTCAAGGAAGGTTTATTAGCTGGAAGCACTACTGATAATTGCCAAGCTCAGTGGAAAAGAGCATTTACCAATTGTTTTCTTAAGGTTGATGCTGAAGTTGGAGGAAAATCTAGAACCGAGCCTGTGGCCTCGGAAACTGTCGGTTCAACTGCTGTCACTGCAATAATTTGTGCGTCTCATATTATAGTAGCTAATTGTGGAGATTCAAGAGCTGTGCTGTGTCGTGGGAAAGAGCCGAAGGCCTTGTCAGTGGACCATAAACCTAATAGAGAAGATGAATATGCAAGAATCGAGGCTGCCGGAGGAAAGGTCATTCAATGGAATGGGCACCGTGTTTTTGGTGTCCTTGCAATGTCAAGGTCTATCGGCGATAGATACTTGAAACCGTGGATCATTCCGGAGCCCGAAGTGACGTTTCTTCCTCGAGCTCGAGACGATGAATGTCTAATTCTCGCGAGTGATGGTTTGTGGGATGTAATGTCCAACGAAGAGGCATGTGACTTGGCTCGAAGAAGAATTCTCCTCTGGCACAAAAAGAATGCCTCCCTTAATCTAACCCACGAAAGGGACGGAGGAATCGACCCTGCAGCCCAAGCGGCAGCCGAGTATCTATGCAACAGAGCTCTTCAGAAGGGTAGTAAAGACAACATTACTGTGATCGTAGTGGACTTGAAAGCTCAGAGGAAGTTCAAGACAAAAACATGA 960 46.77 MSPFGGLHRCAEEDPRWKMPWLLFLVSLKFLFRCFPMTGLWMVRKKHISHQTVHFLGVYDGHGGFQVANYCQERLHLALAEEIELVKEGLLAGSTTDNCQAQWKRAFTNCFLKVDAEVGGKSRTEPVASETVGSTAVTAIICASHIIVANCGDSRAVLCRGKEPKALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRARDDECLILASDGLWDVMSNEEACDLARRRILLWHKKNASLNLTHERDGGIDPAAQAAAEYLCNRALQKGSKDNITVIVVDLKAQRKFKTKT 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49031016 49032770 - Bda003571.1 Bda01g01335 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01335 319 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 40 319 - -
Bda01g01335 319 Pfam Protein phosphatase 2C 49 302 IPR001932 -
Bda01g01335 319 Gene3D - 36 319 IPR036457 -
Bda01g01335 319 ProSitePatterns PPM-type phosphatase domain signature. 55 63 IPR000222 GO:0043169
Bda01g01335 319 CDD PP2Cc 50 309 IPR001932 -
Bda01g01335 319 SMART PP2C_4 23 307 IPR001932 -
Bda01g01335 319 ProSiteProfiles PPM-type phosphatase domain profile. 37 309 IPR001932 -
Bda01g01335 319 PANTHER ALPHABET, ISOFORM E-RELATED 40 319 - -
Bda01g01335 319 SUPERFAMILY PP2C-like 48 310 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01335 Bda-Chr1:49031016 Bda03g00136 Bda-Chr3:1182055 3.60E-157 dispersed
Bda01g01335 Bda-Chr1:49031016 Bda01g01341 Bda-Chr1:49109190 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01335 K14497 - zju:107420119 480.33