Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01340 ATGTCACCGATTTTCTCGCCCGAAGAATCAGTGCCGATCAACACGACGGTGGTGGCTATCGACAAGGACAAGAACAGCCCACACGCTGTGAGATGGGCGATTGATCATGTGGCGATGAATTGTCCGCTTCTCGTACTGATTCACTCGGCGAGTGATGCCGATCAAGCGGAACCTGATGTGCAGCAGCTTTTCGTTCCGTATCGAGGGTTTTGTGCTCGTAAAGGGGTGCAACTGAAGGAGGTTGTTCTCGACAACAGTGACATTTCCAAAGCTCTTCTGGATTATGTATACAGTAATTGCATAAACAACATTGTTGTAGGTGCTTCAGCAAGAAGTGCTCTAGCTAGGAAATTCAAAGGTTACGACGTTCCGACCAACATAATAAAATCTGCCCCAGACTTTTGTTCAGTTTATGTGATTTCGAAGGGGAAGATAATATCGGCAAAAGCAGCTCTTCGACCAGTTGCCAACACAGCAACACCACCAAGACAGCCATCTCCCATGGCATTTCTTCCTCAAGCTCAGGCTGATAATGGCGACCCGGAAAATGCAGGCAGACCAGGTCAACCTCCGAGGGGAGGATGGAAAAGTGCAGGGGCGGCAGAACGACTAGCTTCCGAAAGAGTCAATAACCAAACAAAGGGAATGACACGAGAGAGACCGAGGAGTTCTCTGACGAATATCTCAATGGAGAGCCTTGACGTTCCAAATCGAGGATCAAGAACATCATTTAGCCGCGATTCAGTCTCCGACGAGAATGCATTTGGAGGGCAGCTGTTGTTTGGCTCCATGGATGTGACTGGCCAATGTTTAGATTTTAATAATGTGTCAAATTCTGCAGAAGAATCATCTTCACAATCTACACGAGATCTAGAGGCAGAAATGAAGAGATTAAAGTTAGAGCTTAAGCAAACCATGGATATGTATAGCTCAGCTTGCAAAGAAGCAATCTCAGCTAAAAACAAGGCTAAAGAACTCCATCAATGGAAGGTAGAGGAGGCTCGAAAACTGGAGGAAGTGAAACTTGCAGAGGAGGCAGCTCTTGCCATTGCAGAGATGGAGAAAGCCAAGTGCAAAGCTGCAATCGAAGCAGCCGAGGCAGCACAAAGGGTGGCCGAGAAAGAAGTTTTGAAAAGAAAACAGGCCGAGATGAAAGCAAGAAAAGAGGCCGAAGAGAAGAATCGGGCATTGACTGCATTAGCGCATAATGATGTTCGGTACAGAAAATACAGCATTGATGAGATTGAAACTGCCACTGAGAAATTCTCCGATGACCTGAAGATCGGCGAAGGTGGCTACGGACCCGTTTATAAAGGCAAACTCGATCATACGCCAGTTGCCATCAAAGTTTTACGGCCTGATGCAGCTCAAGGCAGGAAGCAATTCCAACAAGAGGTCGAAGTACTCAGCTGCATAAGGCATCCTCACATGGTTCTTCTCCTAGGCGCTTGTCCGGAATACGGATGTTTAGTATACGAGTTTATGAACCACGGGAGCTTAGAAGACCGGCTTTTTCGCCGGGGAAATACTCCTCCGATATCGTGGAGAAGACGATTCAAAATATCAGCAGAAGTCGCCACCGCTCTCTTGTTTCTCCACCAATCAAAACCTGAGCCTCTCGTCCACAGAGATCTCAAGCCAGCCAACATTCTCTTGGATCGAAACTACGTGAGTAAAATCAGCGATGTTGGATTAGCACGATTAGTCCCTCCGTCTATAGCCGACCAAGTAACTCAATATCACATGACTTCAGCAGCTGGAACCTTCTGTTACATCGATCCAGAGTATCAACAAACTGGAAAATTAACAACTAAGTCGGATGTGTACTCGTTTGGTATAATGCTTCTCCAAATCATCACGGCCAAGCCGCCGATGGGTCTGGCTCACCATGTTCAAAGGGCCATCGACAAGGACAGATTCGAAGAGATGCTAGACCCTGCAGTCCCAGACTGGCCTGTGCAAGAGGCTCTATCGTTTGCTAAATTGGCTTTGAAATGTGCAGAGCTGAGGAAGAAGGATAGGCCAGATCTCGGCAATGACATTGTCCCCGAGCTTAACCGATTGAGAGATGTCGGAAAAAATTCAGCTGAGTCCGAGAGTCTCAGACATAGCAATGGTTCGAGAAGTTCGAGTCCAATTCCTCGTACTCTGCCTAAGTTATTGATTGCAAATCAGGTACATATAACTTTCTTATCTCTATTGATCTAG 2208 46.74 MSPIFSPEESVPINTTVVAIDKDKNSPHAVRWAIDHVAMNCPLLVLIHSASDADQAEPDVQQLFVPYRGFCARKGVQLKEVVLDNSDISKALLDYVYSNCINNIVVGASARSALARKFKGYDVPTNIIKSAPDFCSVYVISKGKIISAKAALRPVANTATPPRQPSPMAFLPQAQADNGDPENAGRPGQPPRGGWKSAGAAERLASERVNNQTKGMTRERPRSSLTNISMESLDVPNRGSRTSFSRDSVSDENAFGGQLLFGSMDVTGQCLDFNNVSNSAEESSSQSTRDLEAEMKRLKLELKQTMDMYSSACKEAISAKNKAKELHQWKVEEARKLEEVKLAEEAALAIAEMEKAKCKAAIEAAEAAQRVAEKEVLKRKQAEMKARKEAEEKNRALTALAHNDVRYRKYSIDEIETATEKFSDDLKIGEGGYGPVYKGKLDHTPVAIKVLRPDAAQGRKQFQQEVEVLSCIRHPHMVLLLGACPEYGCLVYEFMNHGSLEDRLFRRGNTPPISWRRRFKISAEVATALLFLHQSKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSIADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDVYSFGIMLLQIITAKPPMGLAHHVQRAIDKDRFEEMLDPAVPDWPVQEALSFAKLALKCAELRKKDRPDLGNDIVPELNRLRDVGKNSAESESLRHSNGSRSSSPIPRTLPKLLIANQVHITFLSLLI 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49098768 49101941 - Bda003577.1 Bda01g01340 1340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01340 735 CDD STK_N 15 143 - -
Bda01g01340 735 Gene3D Transferase(Phosphotransferase) domain 1 495 708 - -
Bda01g01340 735 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 710 - -
Bda01g01340 735 MobiDBLite consensus disorder prediction 157 249 - -
Bda01g01340 735 CDD STKc_IRAK 428 688 - -
Bda01g01340 735 Gene3D Phosphorylase Kinase; domain 1 400 494 - -
Bda01g01340 735 Coils Coil 288 308 - -
Bda01g01340 735 SUPERFAMILY Protein kinase-like (PK-like) 405 677 IPR011009 -
Bda01g01340 735 SMART serkin_6 422 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01340 735 Gene3D HUPs 12 142 IPR014729 -
Bda01g01340 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Bda01g01340 735 MobiDBLite consensus disorder prediction 688 714 - -
Bda01g01340 735 Pfam Protein tyrosine and serine/threonine kinase 427 677 IPR001245 GO:0004672|GO:0006468
Bda01g01340 735 MobiDBLite consensus disorder prediction 698 714 - -
Bda01g01340 735 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 139 - -
Bda01g01340 735 MobiDBLite consensus disorder prediction 206 249 - -
Bda01g01340 735 PANTHER OS02G0152300 PROTEIN 15 710 - -
Bda01g01340 735 Coils Coil 348 400 - -
Bda01g01340 735 ProSiteProfiles Protein kinase domain profile. 422 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01340 Bda11g01037 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01340 Bda-Chr1:49098768 Bda13g01593 Bda-Chr13:39499540 0 dispersed
Bda01g01336 Bda-Chr1:49040706 Bda01g01340 Bda-Chr1:49098768 3.39E-145 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69444 PF07714 PK_Tyr_Ser-Thr 1.30E-41 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01340 - - csv:101203326 991.49