Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01341 ATGGAGGAAATGTCTACGGCGGTTGCAGTGCCATTTAGAGTAGGTAACCAAGTCTTTGATAATCCAAATCTAGCTACACACATGGATATCACAAGGCTTAAGCTGATGACAGACACAGCCGGATTACTATCTGATTCTATAGCTAATGGCTCCTCTGAGCTAGTTGAAAGAACTGATGAGGATTGTATCAGTGGTGATTTGGAGAATGAAGTGATTATGGAGATAGTTGAAGAAGAGCGAAGAGCATTTCCTTTATTGGGTATGAGATCTCAAAATACGAGCAACTGGGTGGCTGCAGGCGAGGTAGTAGTCCAAGAAAGCGAGGAAGATGATTCGTTATCATTGGAGGGGGATCACAATCTCGACAGCTCTTGTTCGCTCTCTGTTGTGAGTGAAAATAGTAGCATATGTGGAGACGATTTCTTTGATTTTCAGACATCTTACGATGTTGAAACAAGTAGTTCCGGAGACATAGAGAAGAGGACTTGCGATGTTGATAATCCGGGAAAAGGCGACAATTTAGGTGGTTCAACTATTGGAAAAGAAACGGGGAGTGATCCTCTTTCTGCTGCAGTGAACCTTGAGGAAGATATTCAAAATGTTGTTGAACCGGAGGCATCTAAATTGGTTTTTCAATTACCTCTTGTCGAAAAAGGAAGTAGCGGACTAGTCAGCCGTAGTGTTTTTGAAGTGGATTATGTCCCCCTTTGGGGGTCTACATCGTTGTGCGGAAGAAGACCCGAGATGGAAGATGCCTTGGCTACTGTTCCTTGTTTCTTTGAAGTTCCTATTCAGATGCTTTCCGATGACTGGGCTGTGGATGGTCCGAAAAAGCACATATCTCATCAAACGGTTCATTTTCTCGGAGTCTATGACGGCCACGGTGGTTTCCAGGTTGCTAACTACTGTCAGGAGCGACTTCACTTGGCTTTAGCCGAGGAGATTGAATTAGTCAAGGAAGGTTTATTAGCTGGAAGCACTACTGATAATTGCCAAGCTCAGTGGAAAAGAGCATTTACCAATTGTTTTCTTAAGGTTGATGCTGAAGTTGGAGGAAAATCTAGAACCGAGCCTGTGGCCTCGGAAACTGTCGGTTCAACTGCTGTCACTGCAATAATTTGTGCGTCTCATATTATAGTAGCTAATTGTGGAGATTCAAGAGCTGTGCTGTGTCGTGGGAAAGAGCCGAAGGCCTTGTCAGTGGACCATAAACCTAATAGAGAAGATGAATATGCAAGAATCGAGGCTGCCGGAGGAAAGGTCATTCAATGGAATGGGCACCGTGTTTTTGGTGTCCTTGCAATGTCAAGGTCTATCGGCGATAGATACTTGAAACCGTGGATCATTCCGGAGCCCGAAGTGACGTTTCTTCCTCGAGCTCGAGACGATGAATGTCTAATTCTCGCGAGTGATGGTTTGTGGGATGTAATGTCCAACGAAGAGGCATGTGACTTGGCTCGAAGAAGAATTCTCCTCTGGCACAAAAAGAATGCCTCCCTTAATCTAACCCACGAAAGGGACGGAGGAATCGACCCTGCAGCCCAAGCGGCAGCCGAGTATCTATGCAACAGAGCTCTTCAGAAGGGTAGTAAAGACAACATTACTGTGATCGTAGTGGACTTGAAAGCTCAGAGGAAGTTCAAGACAAAAACATGA 1656 44.93 MEEMSTAVAVPFRVGNQVFDNPNLATHMDITRLKLMTDTAGLLSDSIANGSSELVERTDEDCISGDLENEVIMEIVEEERRAFPLLGMRSQNTSNWVAAGEVVVQESEEDDSLSLEGDHNLDSSCSLSVVSENSSICGDDFFDFQTSYDVETSSSGDIEKRTCDVDNPGKGDNLGGSTIGKETGSDPLSAAVNLEEDIQNVVEPEASKLVFQLPLVEKGSSGLVSRSVFEVDYVPLWGSTSLCGRRPEMEDALATVPCFFEVPIQMLSDDWAVDGPKKHISHQTVHFLGVYDGHGGFQVANYCQERLHLALAEEIELVKEGLLAGSTTDNCQAQWKRAFTNCFLKVDAEVGGKSRTEPVASETVGSTAVTAIICASHIIVANCGDSRAVLCRGKEPKALSVDHKPNREDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRARDDECLILASDGLWDVMSNEEACDLARRRILLWHKKNASLNLTHERDGGIDPAAQAAAEYLCNRALQKGSKDNITVIVVDLKAQRKFKTKT 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49109190 49111640 + Bda003578.1 Bda01g01341 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01341 551 CDD PP2Cc 238 541 IPR001932 -
Bda01g01341 551 Gene3D - 223 551 IPR036457 -
Bda01g01341 551 SUPERFAMILY PP2C-like 229 542 IPR036457 -
Bda01g01341 551 SMART PP2C_4 222 539 IPR001932 -
Bda01g01341 551 MobiDBLite consensus disorder prediction 155 184 - -
Bda01g01341 551 ProSitePatterns PPM-type phosphatase domain signature. 287 295 IPR000222 GO:0043169
Bda01g01341 551 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 119 551 - -
Bda01g01341 551 Pfam Protein phosphatase 2C 280 534 IPR001932 -
Bda01g01341 551 ProSiteProfiles PPM-type phosphatase domain profile. 236 541 IPR001932 -
Bda01g01341 551 PANTHER ALPHABET, ISOFORM E-RELATED 119 551 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01341 Bda03g00136 CCT
Bda01g01341 Bda03g00136 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01341 Bda-Chr1:49109190 Bda03g00136 Bda-Chr3:1182055 0 dispersed
Bda01g01335 Bda-Chr1:49031016 Bda01g01341 Bda-Chr1:49109190 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01341 K14497 - zju:107420119 740.339