Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01348 ATGTATACAGCAAAGCGAGAAACCAATGCTGCTGTATTAATACAAAGAAATGTTCGCAAGTGGCTTATACACAGTGCTTACATGACAATTCATTTTGCGACTTCAGTTATCCAGTCTAATATTCGTGGTTTCTTAGATCGCCAAAAATTTTTGCATCAAAAGAAACATAAAGCGGCTACATTGATTCAGGCTCGATGGAGAACATGCAAGGTTCGTACTGTTTTCCGCCGTGATCAAGCTTCCGTGGTTGCCATTCAGTGCCGTTGGCGGCAAAAGATGGCAAAAAGAGAACTTCGAAGGCTTAAGCAAGAAGCCAATGAAGCTGGGGCATTGCGTTTGGCTAAGAATAAACTTGAGAAGCAAATAGAAGAGCTCACATGGCGGTTACATCTGGAAAAACGGTTGCGGGTTTCCAATGAAGAGGCCAAGTCAATAGAAATTTCAAAACTTCAAAAGATGTTGGTCTCTCTTAACATGGAGTTAGATGCAGGAAAATTAGCAACAATTAACGAGTGCAACAAAAACGCGGTGTTGCAGAATCAATTGGAGTTGTCGGCAAAAGAGAAGTCTGCTTTGGAAAGAGAAAGTATAGCGATGGCAGAGTTGAGAAGGGAAAATGCGTTGCTTAGGAGTTCGTTGAAAGCCCTGGAGAAAAAAGATTCAGCTCTGGAGATTGAGCTAATGAAGTATCAAAGAGATAGCAACGAAACAATTGAGAAGCTGAAGGAAGTTGAACAAAAGTGTTCTCAGCTTCAGCAAACTGTGAAAAGTTTGGAGGAAAAACTCTTACTTCTAGAGAATGATAATCATGTCCTGCGACAAAAAGCATTTAGTGCAACTCCCAAGAGCATCCGTCCTGGTATTGTTAAGTCATTAACAGAGAAATCATTCGGTGCTCAAGGTATTACTCCACAAACTGATCGGAAATCTTTATTTGAGTCACCAACGCCAACAAAACCTACGGTACCCTATGCCCATGGCCTAACAGATTCTCGTCGTTCAAAGCTGGTGATTGAGAGGCATCAGGAAAACTACGAATTTCTCTCTAGGTGCCTCAAAGAAGATATGGGCTTCAAAGGTGGTAAACCACTTGCTGCATGCGTCATATACAAATGCCTTCTTCATTGGCATGCTTTTGAATATGAAAGAACAGTTATTTTTGACTTCATAATTGAAGGAATTAATGAAGCTCTTAAGGTTGGGGATGAAAGAATTACATCGCCATATTGGTTGTCCAATGCATCTGCTCTGCTATGCCTTCTGCAGAGAAATTTACGGTCAAATGGATTTCTTAATACATCTGCTCAGCGTTCTACTGGGTTATCAACCAGAATTGCGCAAGGCCTAAAATCACCTTTCAAACATTTGGGATTTGAAGATGGGATATCTCATCTTGAAGCGAGATATCCTGCTGTACTTTTCAAACAACAACTCACTGCTTGTGTGGAAAAGATATTTGGTTTGATTCGCGACAACTTGAAAAAGGAACTATCTCCACTCTTGGGCTTGTGCATTCAGGCACCAAAAACTGCTCGAGTGCATTCAGGAAAATCTTCTAGATCGCCTGGTGGACCTCTTCCGCTGCCTCCGAGCAGCCAGTGGGATAAAATTATCAATTTTTTGGATTCTCTGATGAGTCAATTACGCGAAAATCATGTGCCTTCCTTCTTTATCCGAAAATTAACTACTCAGGTGTTTTCTTTTATCAATATTTCGCTTTTCAATAGTCTTCTACTGCGACGTGAATGTTGTACATTTTCAAATGGAGAATATGTGAAATCTGGGCTAGCAGATCTGGAGAAATGGATTGTCAATGCCAAAGAAGAGTATGCGGGGACATCATGGCACGAGCTAAATTATATAAGGCAAGCTGTTGGATTTCTGGTTATACATCAGAAGAGAAAAAAATCGCTAGAAGAGATAAGACAGGATCTTTGTCCGGCACTGACTGTTAGACAAATTTATCGGATAAGTACAATGTACTGGGATGACAAATATAGCACCCAAAGCGTATCTAATGAGGTGGTTGCTCAAATGAGAGAGATTTTGGACAAGGATAATCAGAACTTGACGTCCAATTCCTTCTTGTTGGATGATGATCTGAGCATCCCATTCTCTACTGAAGACATAGATATGGCTATTCCTGCTATAAACCCATCCGACATCGACCTTCCTAATTTCGTATCAGAATATCCCTGCGTACGGTTTTTGGTTCAAAGCGTATGA 2226 40.79 MYTAKRETNAAVLIQRNVRKWLIHSAYMTIHFATSVIQSNIRGFLDRQKFLHQKKHKAATLIQARWRTCKVRTVFRRDQASVVAIQCRWRQKMAKRELRRLKQEANEAGALRLAKNKLEKQIEELTWRLHLEKRLRVSNEEAKSIEISKLQKMLVSLNMELDAGKLATINECNKNAVLQNQLELSAKEKSALERESIAMAELRRENALLRSSLKALEKKDSALEIELMKYQRDSNETIEKLKEVEQKCSQLQQTVKSLEEKLLLLENDNHVLRQKAFSATPKSIRPGIVKSLTEKSFGAQGITPQTDRKSLFESPTPTKPTVPYAHGLTDSRRSKLVIERHQENYEFLSRCLKEDMGFKGGKPLAACVIYKCLLHWHAFEYERTVIFDFIIEGINEALKVGDERITSPYWLSNASALLCLLQRNLRSNGFLNTSAQRSTGLSTRIAQGLKSPFKHLGFEDGISHLEARYPAVLFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTARVHSGKSSRSPGGPLPLPPSSQWDKIINFLDSLMSQLRENHVPSFFIRKLTTQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLADLEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYSTQSVSNEVVAQMREILDKDNQNLTSNSFLLDDDLSIPFSTEDIDMAIPAINPSDIDLPNFVSEYPCVRFLVQSV 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49198409 49205246 + Bda003585.1 Bda01g01348 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01348 741 PANTHER MYOSIN 2 738 - -
Bda01g01348 741 Gene3D - 57 106 - -
Bda01g01348 741 Gene3D - 4 56 - -
Bda01g01348 741 Coils Coil 91 135 - -
Bda01g01348 741 PANTHER PROTEIN OPAQUE1-LIKE 2 738 - -
Bda01g01348 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 105 IPR027417 -
Bda01g01348 741 Pfam IQ calmodulin-binding motif 33 50 IPR000048 GO:0005515
Bda01g01348 741 Pfam IQ calmodulin-binding motif 56 76 IPR000048 GO:0005515
Bda01g01348 741 Pfam IQ calmodulin-binding motif 8 27 IPR000048 GO:0005515
Bda01g01348 741 ProSiteProfiles IQ motif profile. 30 59 IPR000048 GO:0005515
Bda01g01348 741 SMART iq_5 6 28 IPR000048 GO:0005515
Bda01g01348 741 SMART iq_5 77 99 IPR000048 GO:0005515
Bda01g01348 741 SMART iq_5 54 76 IPR000048 GO:0005515
Bda01g01348 741 SMART iq_5 29 51 IPR000048 GO:0005515
Bda01g01348 741 SMART DIL_2 560 667 IPR002710 -
Bda01g01348 741 CDD MyosinXI_CBD 339 708 IPR037975 GO:0007015
Bda01g01348 741 ProSiteProfiles IQ motif profile. 55 84 IPR000048 GO:0005515
Bda01g01348 741 Pfam DIL domain 561 664 IPR002710 -
Bda01g01348 741 ProSiteProfiles IQ motif profile. 78 107 IPR000048 GO:0005515
Bda01g01348 741 Coils Coil 175 275 - -
Bda01g01348 741 ProSiteProfiles Dilute domain profile. 388 685 IPR002710 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01348 Bda13g01585 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01348 Bda-Chr1:49198409 Bda12g00355 Bda-Chr12:4099685 0 dispersed
Bda01g01348 Bda-Chr1:49198409 Bda13g01585 Bda-Chr13:39355497 3.65E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01348 K10357 - zju:107420053 1151.35