Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01352 ATGATGCACATGACCTTTTACTGGAGCAAGGAGGTAACGCTCCTATTCGACTCATGGCGGACCAAATCATGGACCGGCTACGCTCTCACCTTGCTCGCCTGCGTCGTCGTCTCCGCCTTTTACCAGTACTTGGAGAACCTTCGCGTCCGTTTGAAGCTCCTTTCCTCCGGCAACCCATCTCCTTCTGAGATCGAAACTCCACTTCTCCAATCTAAATTTCTCAGCTTCGGATCCGGAAAGTTGTCGGCGGTTAGGTTCGCTGGAGCTGCGCTTTTTGGTGTGAATTCTGCGATTGGGTACCTTCTGATGCTTGCGATCATGTCCTTTAATGGAGGCGTCTTTGTGGCCGTCGTTGTAGGGCTTACTATCGGGTATTTAGTGTTTAGGAGTGGGGACGAGGATGGTTCTGTTGTGGTTGATAATCCTTGTGCCTGTGCCTGA 441 51.25 MMHMTFYWSKEVTLLFDSWRTKSWTGYALTLLACVVVSAFYQYLENLRVRLKLLSSGNPSPSEIETPLLQSKFLSFGSGKLSAVRFAGAALFGVNSAIGYLLMLAIMSFNGGVFVAVVVGLTIGYLVFRSGDEDGSVVVDNPCACA 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49218245 49218685 - Bda003589.1 Bda01g01352 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01352 146 PANTHER COPPER TRANSPORTER 5.1-LIKE 1 146 - -
Bda01g01352 146 Pfam Ctr copper transporter family 4 128 IPR007274 GO:0005375|GO:0016021|GO:0035434
Bda01g01352 146 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 146 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00645 Bda01g01352 CCT
Bda01g00645 Bda01g01352 ECH
Bda01g01352 Bda01g00645 ECH
Bda01g01352 Bda13g01584 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01352 Bda-Chr1:49218245 Bda03g01379 Bda-Chr3:50016818 9.15E-16 dispersed
Bda01g01352 Bda-Chr1:49218245 Bda13g01584 Bda-Chr13:39340300 2.14E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01352 K14686 - zju:107420148 215.312