Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01358 ATGGTGAAGATGAAGTCTTTTGTTTGTTGGCCGGTTTTGGTCGTTTTTCTTTTTGGGTTTTCGTCGGCGGAGTCGGAGAACACGCCGACGCCGGTGAATGTGGGGTTGGTGCTTGATTTAGATGGAGAAGTTGGGAGGATGACACTGAGCTGTATAGACATTGCTCTCTCCGACTTCTATTCCTCCCACGGTGGTTTCAAGACCAGGCTCGTGCTTAATACCAGAGACTCCATGAAAGACGTTGTCGGAGCCGCTGCTGCAGGCCTAGACCTTGTGAAGAATGCGAAGGTGGAAGCTATAATCGAACCAGTGAGTTCAATGCAAGCTAACTTCTTGATTGAACTCGGAGAAAATGCTCATGTCCCCATTATATCATTTTCGGCCACGAGCTCTTTGCTAGCATCTCTTGGGAGTTCATATTTTTTCCGCGTCGCGCAAAATGACTCGTCTCAAGTTCAACCCATTTGTTCAATTCTCAAAGCTTTTGGGTGGAGAGAGGTCGTGCCTATCTACGTAGATAATGCGTTTGGGCAGGGAATTATACCCTACTTGGCCGATGCATTACAGGACATAGACGCTCTCATGCCTTATAGAAGTGCCATTCCTTCGTCAGCCTCTGATGATCAAATTGCAGCAGAGCTATACAAGTTGATGAGCATGCACACTAGGGTTTTTGTTCTCCATCTCCTGCCTAGTCTGGCTTCAAGGATTTTTAAAATGGCGAAAGAGATTGGGATGATGAGCGAAGGCTATGTTTGGATCATGACCGCTTCTATCACTAATCGTTTGACTCAAATAGACGAGTCAGATTTCGATTCGATGCAAGGGGTGTTGGGCATCAAGACTTACATTCCGAGATCGACCAAGCTAGATGATTTCAAAGTGAGATGGACAAGCAAGTTTCGGCAAGATAATCTGACCGATCTATATACTCAACTGAATGTTTTTGGACTGTGGAGCTATGATGCGGCTTGGGCATTAGCCATGGCTGTCGAGGCAACCCTTTCGACATTTAACCTTGGCTATCAAAAATCAACCAATGGAACTAATCTTGACAATGTCGGGATTTCTCTGAACGGCCGGAGAATTCGCGACCAGCTTTCCAAGACGACATTTACAGGACTTAGCGGGAATTTTAGCCTTGTCGATGGCCAATTGCAGTCTACTACTTTTGAAATAGTGAATATAAATGGTCATCTAGGTATACCCATTGGATATTGGACACCCAAAACTGGTCTCTCAAAAAGTTTGGGTCCATCTTCTTCGGCTGGAGCAACTCTAGGTACAATCCTATGGCCAGGAGATTCTACTTCAATTCCAAATGGATGGGAGATTCCAACAAATGGTAAGAAATTGAGAGTAGGAGTTCCTTACAAGGACGGATTCAGCAAATTTATGAAAATAACAAATGATTCCATCTCAAATGCTACAACCGTCAAAGGCTACTGCATAGACATCTTTAAAGCAGTTCTTAAGGAGTTACCTTACGCAATTGTTCCAGACTTCATCCCGTTTAACCCCCCATTCATTCGTTTATTTGTTTCACACTATCTTGTTGAGCTTCGTGATAATTGTGGTTTCTGGATGGACAGAACTTCGATGCAGTGGTGGGGGACGTGA 1620 44.51 MVKMKSFVCWPVLVVFLFGFSSAESENTPTPVNVGLVLDLDGEVGRMTLSCIDIALSDFYSSHGGFKTRLVLNTRDSMKDVVGAAAAGLDLVKNAKVEAIIEPVSSMQANFLIELGENAHVPIISFSATSSLLASLGSSYFFRVAQNDSSQVQPICSILKAFGWREVVPIYVDNAFGQGIIPYLADALQDIDALMPYRSAIPSSASDDQIAAELYKLMSMHTRVFVLHLLPSLASRIFKMAKEIGMMSEGYVWIMTASITNRLTQIDESDFDSMQGVLGIKTYIPRSTKLDDFKVRWTSKFRQDNLTDLYTQLNVFGLWSYDAAWALAMAVEATLSTFNLGYQKSTNGTNLDNVGISLNGRRIRDQLSKTTFTGLSGNFSLVDGQLQSTTFEIVNINGHLGIPIGYWTPKTGLSKSLGPSSSAGATLGTILWPGDSTSIPNGWEIPTNGKKLRVGVPYKDGFSKFMKITNDSISNATTVKGYCIDIFKAVLKELPYAIVPDFIPFNPPFIRLFVSHYLVELRDNCGFWMDRTSMQWWGT 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49351516 49354358 + Bda003596.2 Bda01g01358 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01358 539 Pfam Receptor family ligand binding region 51 398 IPR001828 -
Bda01g01358 539 CDD PBP1_GABAb_receptor_plant 33 417 IPR044440 -
Bda01g01358 539 Gene3D - 358 450 - -
Bda01g01358 539 Gene3D - 451 526 - -
Bda01g01358 539 PANTHER OS06G0188250 PROTEIN 5 506 - -
Bda01g01358 539 SUPERFAMILY Periplasmic binding protein-like I 29 443 IPR028082 -
Bda01g01358 539 PANTHER OS06G0188250 PROTEIN 5 506 - -
Bda01g01358 539 Gene3D - 149 318 - -
Bda01g01358 539 SUPERFAMILY Periplasmic binding protein-like II 425 504 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01358 Bda13g01838 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01339 Bda-Chr1:49068838 Bda01g01358 Bda-Chr1:49351516 0 dispersed
Bda01g01358 Bda-Chr1:49351516 Bda13g01578 Bda-Chr13:39270395 0 dispersed
Bda01g01357 Bda-Chr1:49303673 Bda01g01358 Bda-Chr1:49351516 0 tandem
Bda01g01358 Bda-Chr1:49351516 Bda01g01359 Bda-Chr1:49406524 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01358 K05387 - qsu:112030675 553.903