Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01359 ATGGTGAAGATGAAGTCTTTTGTTTGTTGGCCGGTTTTGGTCGTTTTTCTTTTTGGGTTTTCGTCGGCGGAGTCGGAGAACACGCCGACGCCGGTGAATGTGGGGTTGGTGCTTGATTTAGATGGAGAAGTTGGGAGGATGGCACTGAGCTGTATAAACATTGCTCTCTCCGACTTCTATTCCTCCCACGGTGGTTTCAAGACCAGGCTCGTGCTTAATACCAGAGACTCCATGAAAGACGTTGTCGGAGCCGCTGCTGCAGGCCTAGACCTTGTGAAGAATGCGAAGGTGGAAGCTATAATCGGACCAGTGAGTTCAATGCAAGCTAACTTCTTGATTGAACTCGGAGAAAATGCTCATGTCCCCATTATTTCATTTTCGGCCACGAGCTCTTTGCTAGCATCTCTTGGGAGTTCATATTTTTTCCGCGTCGCGCAAAACGACTCGTCTCAAGTTCAACCCATTTGTTCATTTCTCAAAGCTTTTGGGTGGAGAGAGGTCGTGCCGATCTACGTAGATAATGCGTTTGGGCAGGGAATTATACCCTACTTGGCCGATGCATTACAGCACATAGACGCTTTCATGCCTTATAGAAGTGCCATTCCTTCGTCAGCCTCTGATGATCAAATTGCAGAAGAGCTGTACAAGCTGATGAGCATGCAAACTAGGGTTTTTGTTCTCCATCTCCTGCCTAGTCTGGCTTCAAGGATTTTTAAAATGGCGAAAGAGATTGGGATGATGAGCGAAGGCTATGTTTGGATCATGACCGATTCTATCACTAATCTTTTGACTCAAATAGACGAGTCAGATTTCGATTCGATGCAAGGGGTGTTGGGCGTGAAGACTTACATTCCGAGATCGACCAAGCTAGATGATTTCAAAGTGAGATGGACGAGCAAGTTTCGGCAAGATAATCCGACCAATCTCAATGCTCAACTGAATGTTTTTGGACTGTGGAGCTATGATGCGGCTTGGGCATTAGCCATGGCTGTCGAGGCAACCCTTTCGACTTCTAACCTTGGCTATCAAAATTCCAGTAGCTCAACCAATGGAACTAATCTTGACAATGTCGGGGTTTCTCTGAACGGCCCGAGAATTCGCGACCAGCTTTCCAATACGACATTTACAGGACTTAGTGGGAAGTTTAGCCTTGTCGACGGCCAATTGCAGTCTACAACTTTTGAAATAGTGAATATATATGGCCATATAGGGAAGCCTATTGGATACTGGACACCCAAAACTGGTCTCTCAAGAAGTCTGAGTTCATCTTCTTTGGCTAGAGCAACTCTAGGGACAATCCTATGGCCAGGAGATTCTACTTCAATTCCAAAGGGATGGGAGATTCCAACAAATGGTAAGAAACTGAGAGTAGGAGTTCCTTACCAGGACGGATTCAGCGAATTTGTGAAAATAACAAATGATTCCATCTCGAATGTCACAACCGTCACAGGCTACTGCATAGACATCTTCAATGCAGTTCTTGAAGAGTTACCTTACGCCATTGTTCCAGACTTCATTCCGTATAACCCCCCTAATTATACATACGATGATTTGATCAAACAAGTCAAACTCGGGGTGGGTATTCTTTCGTTTATTTGTTTCACCAAATCTTTTTGA 1617 44.96 MVKMKSFVCWPVLVVFLFGFSSAESENTPTPVNVGLVLDLDGEVGRMALSCINIALSDFYSSHGGFKTRLVLNTRDSMKDVVGAAAAGLDLVKNAKVEAIIGPVSSMQANFLIELGENAHVPIISFSATSSLLASLGSSYFFRVAQNDSSQVQPICSFLKAFGWREVVPIYVDNAFGQGIIPYLADALQHIDAFMPYRSAIPSSASDDQIAEELYKLMSMQTRVFVLHLLPSLASRIFKMAKEIGMMSEGYVWIMTDSITNLLTQIDESDFDSMQGVLGVKTYIPRSTKLDDFKVRWTSKFRQDNPTNLNAQLNVFGLWSYDAAWALAMAVEATLSTSNLGYQNSSSSTNGTNLDNVGVSLNGPRIRDQLSNTTFTGLSGKFSLVDGQLQSTTFEIVNIYGHIGKPIGYWTPKTGLSRSLSSSSLARATLGTILWPGDSTSIPKGWEIPTNGKKLRVGVPYQDGFSEFVKITNDSISNVTTVTGYCIDIFNAVLEELPYAIVPDFIPYNPPNYTYDDLIKQVKLGVGILSFICFTKSF 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49406524 49408871 + Bda003598.1 Bda01g01359 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01359 538 Gene3D - 361 453 - -
Bda01g01359 538 PANTHER OS06G0188250 PROTEIN 5 526 - -
Bda01g01359 538 Pfam Receptor family ligand binding region 50 399 IPR001828 -
Bda01g01359 538 CDD PBP1_GABAb_receptor_plant 33 415 IPR044440 -
Bda01g01359 538 Gene3D - 454 529 - -
Bda01g01359 538 PANTHER OS06G0188250 PROTEIN 5 526 - -
Bda01g01359 538 SUPERFAMILY Periplasmic binding protein-like II 428 523 - -
Bda01g01359 538 Gene3D - 149 312 - -
Bda01g01359 538 SUPERFAMILY Periplasmic binding protein-like I 29 447 IPR028082 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01359 Bda-Chr1:49406524 Bda13g01578 Bda-Chr13:39270395 0 dispersed
Bda01g01358 Bda-Chr1:49351516 Bda01g01359 Bda-Chr1:49406524 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01359 K05387 - qsu:112030675 592.423