Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01383 ATGACAACTTCAGGGCCGCCCACTCCAATAGGTGGTGCCCAATCTGTGTCATCTTCATATTTAAGATCAAATTCTGGAATGCTGGGAGCTCAAGAGGGTTCTTTGCCTTCGCAGTCGTCATTTCCTTCACTTGTATCACAACGCAGTCAGTTTAGCAATATGAATATGCTTGGTAATATACCAGATGTTTCTTCTTTCATCAATCAGTCTTTTGCAAATGGGGGTCCAAATTCTGGGCTTTCAGTCCCTGTAAATGGTCAGCATGGAGGCGTTGACCATGGTGCCGAGCTGGATCCACTGTCCAGTGCTGAAAATGGAATGAATTTTAATAATTCTGCGGCGACATTTGTAGCATCGAACATGGGAAACCCTGGTGCTTCCAGTCAAAACCAGGGTCCCCAATTTATGAATCTTTCTGGTAGCCAGCTATTAGCAGAGCAGCAGCTCGAAGCTCAGAAGTTCCAGCATGGTCAGCCGTCGATGCAACAGTTTTCTGTTTCTTCCAGCACCTTGCAGCCACCACAGCACCAATTGCAATCAATTAGAGGAGGCATAGGTGCTGTTGGCCCAGTAAAATTGGAGCCGCAAGTGCTCAGCAATGATCAAGAAGGACAACAAGCTCCACAGCTAAGAAATCTTGGTGCAGTGAAATTAGAAGCCCAACGACTTCAACCCATGAGAGGTTTGACACCAGTAAAATCGGAGTCTCAACACTCTGATCAGTCATTATTTCTTCATCAACAGCAGCAACAGCAACAGATTCTTCAAATGTCTAGACAATCATCACAGGCTGCAGCCCAGATTAATCTTTTGCATCAACAACGACTCTTACAGTTGCAACAGCAACAGCAACAGCAGCAACAACAGCAACAACTTTTAAAAGCTATGCCTCAACAAAGGCTTCAATTACATCAGCAATTACAGCAACAGAATTTGCCTCTAAGGTCGCCTGCAAAACCAACATACGAACCTGGGATGTGTGCTCGGCGGTTGACTCACTACATGTATCAGCAACAACACAGACCGCACGACAACAGTATTGAATTCTGGAGAAAGTTTGTTGCTGAGTACTTTGCTCCCAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGTCGGCAGACAACTGGAGTGTTTCCCCAGGATGCATGGTACTGTGAAATATGCAACCGCAAGCCTGGCCGTGGTTTTGAAGCGGCTTTTGAAGTCCTTCCCAGGCTTTTCAAAATCAAGTATATAAGTGGTACTTTGGAGGAACTTCTTTATGTTGATATGCCATGTGAATATCATAATTCATCTGGTCAGATTGTCTTGGATTATGCGAAAGCTACGCAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGTGATGGCCAACTTCGAATAGTTTTCAATACAGACCTAAAGATTTGTTCTTGGGAGTTTTGTGCGCGACGTCATGAAGAGCTTATTCCTCGAAGATTATTGGTACCCCAGGTTAGTCAGCTTGGGGCAGCAGCCCAAAAATATCACACTACTATGCAAAGTGCATCATCTAATTTATCTGCGCCAGAGTTGCAAAACAACTGCAATATGTTTGTGGCGTCAGCCCGGCAACTGGCTAAAGCTTTGGAAGTTCCATTAGTAAATGATTTAGGGTATACAAAAAGATATGTTAGGTGCCTTCAGATATCAGAAGTTGTTAATAGTATGAAAGACCTTATTGATTACAGCAGAGAAACAGGGAGTGGGCCAATGGATAGTTTAACCAAATTTCCTCGAAGAAGTACATCTTCTGGGTTCCCAACTCAAGCACAACGGGCAGAAGAACTGCAAAAGCAGCAACAGCAGCATCAACAACCACAAACGTCTGTTCAGAACACTAACAATGACCATAGTCTGGTTCAACTGTCGACAAGTAATGGCGTGGCTATGGGCTGTATGAGTAATGCCATCAACTTGGCCTCAACTCCCACCAATGCAAGCACCATAGTTGGGTTGTTACACCAGAATTCAATGAACTCAAGACTACAGAATCCAATGAATAATGGTTTAAACAGCCCTTATGGAGGAAGTTTGATTCCAATTTCATCTCAACAAGCACGACCGAGCACGTCTCAATTCCAACCTCCAACACCCTCGTCGATGAATACCCAGTCACAGCCATCACAGAATGCTGTAGCATCATCGCCTGCAAATCACTTGAATAACACAAATTCTTCACCACATATTCCAATTCCTTTGCACCAACCATCACTTTCTGGGGATAATCAGAATGATTCTCAGAGTTCCGTTCAGAAAATTTTGCAGAAAATGATATCCAACCAAATCACCGACCCAGGAGGTGGCTTGATCAGTACCGGTTCTCTGGTAAATGACGTGAAAAATGTGAATGGGATTTTACCGACAACAGGAAGTGTAAGTCTCAATGGTTTGGCAAATGGAATGGCCATAGGCGGGGGGCTCGGTCAGTCTGCAATGATTGTTAATGGAATGCGATCTGCAGTTGGAAACAACTCGGTTATGAATGGAAGAATGGGAATGGCCGCATTGGCTCGAGATCAAAGCATGAATTTTCAACATCAAGATTTGGGAAACGCAAGACAAGTTCATCCTGATAAGAATCCGAATGACCCAAAGGCTGCAGAAAAATTTCAGGTAAGTCGATTTTCATTGAATGATCAGTATTTGATCAAGTCATGGAATGGGCAGGTACTTGGGGAAGCTTATCAAGTTTTAAGCGATGTTGTTCAAAGAGAATCGTATGATCGAAATGGAAAACACTGCATCTCTAGGGAAACCATGCTTGATCCAACTGCTGTCTTTGCACTTCTATTTGGAAGTGAATCATTCGAGGATTATATTGGACATTTAGCTGTCGCATCAATGGCTTCTTCTGAATTGTCCAGTGAAAGTGAAAATTCAGAGAAGCTACATGATAAGATGAAGGCAATATGTTATATCGTTAGTTTCGCCATTTCGAATCTGTACTTTACGGCACTACTTTGTTTTACGCAGGCTGTCCAAAAAGAGAGGGAAGAAAAACTAGCAAGATTCCTGAAGGATTTTCTTACTCAATATGTTCAAGGTGACAAAGAAGGGTTCTTACGCCGCGCTGTATCTGAAGCAAGACGACTTTCTAACACGACTTTTGGAGTCAACATTCTAAACACGATTGGCCTTGTATATTCGAGACAGGCAGCTCAAGAGCTCGGAAAGAAAGCCATTTATCTTGGGGTGCCATTTTTGGCGGAATGGGTCCGAAATAAGGGTCATTTTTGGAAGTCGCAGATAACAGCAGCGAAAGGCATGAGATTTATAATATCTCTGCTACAACTTCAAGAAGAAATGCGTAAGCAATTTAAAAATGTGCCTGAAAACAATGTTGAATCACACATACGGCTGAATAAAGACACCATGATGAACTCACTGTGGAAGTTAAATGTAGTGGACATAGAAATAACCCTTATACACGTGTGTCAAATGGTGAGTTCTCTGTCTAATCATTTGGATAAATTGTTAGTGAAATTCATGAATTTGCCCCTAAATATGATAATTGATGCTTCTCATGACTTTTTTATATATTCATTCACTGCTTATTTGTTGTGTTTTCAGCAAGATAAAGTTGGAAAAAATGGTGAATCGTCGAGAAGAAAAGGCATTGAAGAAGAAGACAATGAAACCAGTTCCGATAGTAGTGATGAAGAGGAGTCGCCTAGAACGCTATCATATCGAACGCCTTTTCTCACACAGGTAAGCCAGATTGTTCTTTCATTGTTAGTTAAACTTGATCTGTTGCATTCTCAGCATTAA 3798 42.26 MTTSGPPTPIGGAQSVSSSYLRSNSGMLGAQEGSLPSQSSFPSLVSQRSQFSNMNMLGNIPDVSSFINQSFANGGPNSGLSVPVNGQHGGVDHGAELDPLSSAENGMNFNNSAATFVASNMGNPGASSQNQGPQFMNLSGSQLLAEQQLEAQKFQHGQPSMQQFSVSSSTLQPPQHQLQSIRGGIGAVGPVKLEPQVLSNDQEGQQAPQLRNLGAVKLEAQRLQPMRGLTPVKSESQHSDQSLFLHQQQQQQQILQMSRQSSQAAAQINLLHQQRLLQLQQQQQQQQQQQQLLKAMPQQRLQLHQQLQQQNLPLRSPAKPTYEPGMCARRLTHYMYQQQHRPHDNSIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDAWYCEICNRKPGRGFEAAFEVLPRLFKIKYISGTLEELLYVDMPCEYHNSSGQIVLDYAKATQESVFEQLRVVRDGQLRIVFNTDLKICSWEFCARRHEELIPRRLLVPQVSQLGAAAQKYHTTMQSASSNLSAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGSGPMDSLTKFPRRSTSSGFPTQAQRAEELQKQQQQHQQPQTSVQNTNNDHSLVQLSTSNGVAMGCMSNAINLASTPTNASTIVGLLHQNSMNSRLQNPMNNGLNSPYGGSLIPISSQQARPSTSQFQPPTPSSMNTQSQPSQNAVASSPANHLNNTNSSPHIPIPLHQPSLSGDNQNDSQSSVQKILQKMISNQITDPGGGLISTGSLVNDVKNVNGILPTTGSVSLNGLANGMAIGGGLGQSAMIVNGMRSAVGNNSVMNGRMGMAALARDQSMNFQHQDLGNARQVHPDKNPNDPKAAEKFQVSRFSLNDQYLIKSWNGQVLGEAYQVLSDVVQRESYDRNGKHCISRETMLDPTAVFALLFGSESFEDYIGHLAVASMASSELSSESENSEKLHDKMKAICYIVSFAISNLYFTALLCFTQAVQKEREEKLARFLKDFLTQYVQGDKEGFLRRAVSEARRLSNTTFGVNILNTIGLVYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQITAAKGMRFIISLLQLQEEMRKQFKNVPENNVESHIRLNKDTMMNSLWKLNVVDIEITLIHVCQMVSSLSNHLDKLLVKFMNLPLNMIIDASHDFFIYSFTAYLLCFQQDKVGKNGESSRRKGIEEEDNETSSDSSDEEESPRTLSYRTPFLTQVSQIVLSLLVKLDLLHSQH 1265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49717568 49730380 - Bda003624.1 Bda01g01383 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01383 1265 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 859 - -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 1 42 - -
Bda01g01383 1265 Pfam LIM-domain binding protein 330 584 IPR029005 -
Bda01g01383 1265 Gene3D DnaJ domain 856 935 IPR036869 -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 78 103 - -
Bda01g01383 1265 SUPERFAMILY Chaperone J-domain 862 951 IPR036869 -
Bda01g01383 1265 Coils Coil 276 296 - -
Bda01g01383 1265 Pfam X-domain of DnaJ-containing 1004 1158 IPR026894 -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 1206 1221 - -
Bda01g01383 1265 CDD DnaJ 862 910 IPR001623 -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 574 625 - -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 1206 1236 - -
Bda01g01383 1265 ProSiteProfiles dnaJ domain profile. 836 921 IPR001623 -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 585 625 - -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 670 760 - -
Bda01g01383 1265 MobiDBLite consensus disorder prediction 154 178 - -
Bda01g01383 1265 PANTHER LIM DOMAIN-BINDING PROTEIN 1 859 IPR029005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01383 Bda03g00342 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00342 Bda-Chr3:2893279 Bda01g01383 Bda-Chr1:49717568 1.10E-86 transposed
Bda05g00054 Bda-Chr5:3255013 Bda01g01383 Bda-Chr1:49717568 4.01E-114 transposed
Bda07g01884 Bda-Chr7:36290989 Bda01g01383 Bda-Chr1:49717568 1.20E-114 transposed
Bda08g00944 Bda-Chr8:17708643 Bda01g01383 Bda-Chr1:49717568 7.66E-69 transposed
Bda01g01383 Bda-Chr1:49717568 Bda13g01540 Bda-Chr13:38631724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01383 - - pper:18767394 999.964