Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01389 ATGCCGTCTGTTCATTTTCTGCTATTTTGGGTGAGCTTCTTCTTCCTCTTCTTTAACCTAATCTTTCTCTCTCTTTCTTCCCCTTTCTTCCCTGGTTCTAATGTCACACTCTATGGCGACGCGTCTTTCACAAGAAACTCCATTTTTCTCACTCAAACTCCCTCCTGTTTCTCTTCAACTTCCCCTCCGACTTCCCCTTTTTCTCGGCCTTGCGGCGTCGGAAGAGCTTTCCACGTCAACGCAATTCGCTTTCTCGATTGGGCAAACAACTCTGCATCTTTCATCTCCCATTTTTCCTTCTCCATAGTTCGAAAGTCGTTTTGCCCTTCCGGCGACGGGATTGTGCTTCTCATCACCTCTAATGTGAGTTCCTTTAGTCTTTCCCATGGCTACATGGGTCTTCCCGAACCAGCCCTAAACTCTGAAGACACTTTCTTCGCTGTAGAGTTCGATACTAATTTCAATCCTTCTCTCGGAGACATTAATGGAAATCATATCGGCATTGATGTTAATTCTGTTACTTCTTTAGCCTCAGTTGATGTAATTTCGAAAGGAATCGATTTGAAGAGTGGAAACTCTGTGAATGCTTGGGTTGAATACAGACACGACATGAAAATGGTCCGGGTTTATGTTGGGTTGTCACAGATTAGGCCGCCGAATCCTCTTCTTGTTGCTCAGATCGATCTTTCGCAGCATTTCAAGGAGTTCATGCATGTCGGATTCTCTGCTTCGAATGGACAGGGCTCTGCGCTTCACATCATTCACCAATGGCGCTTCAAAACTTTTGAAATTCCGCCTTCTGGGATTCTTCTAGACGATGAAGAAGGGGACTGTTTTATGTGTGTTTCCTCGGAGGGTTCAAGCTTTAACTATGGAGGTTCTGATTCTAGCCAAAGAAAAATCAGAGCAAAGGAAATGGCGCTCGGACTCGGAGGATTAACTGCGTTTTCATGCTCTGTTTTCGCCATTCTCGTCGTAATTGTAGTTTTCTTGCTAAAAAGAAGAAAACAAATAATTAGGAGAAACACCAGAGAAACCCTGGCTTGTGAGTTTCAGACGAACAAAGTTCCATCAAGATTATCACTCGCAGAGTTAAGAACAGCGACAATGGGGTTTAATCGAAGCAGAATCGTTGGAGAAGGAGGATCGGCAACAGTTTACAAAGGATCTCTGCAAAATGGGCGAGAGGTTGCTGTTAAAAGGTTTGAAAGAACCAGTTCCAACTCTAATGATCGAATTCGTAATCCCTTTTCCACCGAGTTTTCAACTATGGCCGATTGTTTAAGACACAAAAACTTGGTTCAACTCCATGGATGGTGCTGCGAAGGATCAGAGCTTGTTCTGGTTTACGAGTATTTACCGAACGGAAGCCTCGACAAAATTCTCCACAGAAACTCCGATCCTCAATTCGTATTATCATGGAAACAGCGACTCAAAATTGTTCTTGGAGTTGCCTCTGCTCTTACTTATCTTCATGAACAATGCGAGAGCCAAGTGATTCACAGAGATGTAAAGACCTGCAATATAATGCTCGACGAAGAGTTTAATCCGAAGCTTGGTGATTTTGGTTTGGCTGAAGTTTACCAGCACAGCTCGATCGACAGAGAAGCGACGGTCCCCGCAGGAACAATCGGCTATCTTGCACCGGAGTACGTATTTTCCGGCATTCCAAGTGTTAAAACCGACGTTTACAGCTTCGGAGTGGTGGTTCTGGAGGTGGCCTCTGGGAGGAAGCCGGTGGAAGACGACGGTACGGTGCTGGTCGATCAAATTTGGAAGCTATGGGAAAGGGGGAGGCTAATGGAGGGCGCTGATCCAAGGTTGAAGAAGAAGTACGATGCGATGGAGATGGAAAGAATGTTAATTGTGGGGCTTAGTTGCGTAAATCCAAACCATGAAAAGCGGCCGACGATGAAGGAAGCTGCGAAGATTTTACGGTGCGAATCTCCGCTTCCTGTGTTGCCGTCGAGGAAGCCGAGGATGAGAATCCGATCAGTTGACGCCGACGATCGTCTTGAAGAATCCGGTGAGCGTCCGAGCCTAGATGATGCGCAGTGGATGACTCCGAGGAGCCATTTTAGTCAGAAGTAA 2091 45.82 MPSVHFLLFWVSFFFLFFNLIFLSLSSPFFPGSNVTLYGDASFTRNSIFLTQTPSCFSSTSPPTSPFSRPCGVGRAFHVNAIRFLDWANNSASFISHFSFSIVRKSFCPSGDGIVLLITSNVSSFSLSHGYMGLPEPALNSEDTFFAVEFDTNFNPSLGDINGNHIGIDVNSVTSLASVDVISKGIDLKSGNSVNAWVEYRHDMKMVRVYVGLSQIRPPNPLLVAQIDLSQHFKEFMHVGFSASNGQGSALHIIHQWRFKTFEIPPSGILLDDEEGDCFMCVSSEGSSFNYGGSDSSQRKIRAKEMALGLGGLTAFSCSVFAILVVIVVFLLKRRKQIIRRNTRETLACEFQTNKVPSRLSLAELRTATMGFNRSRIVGEGGSATVYKGSLQNGREVAVKRFERTSSNSNDRIRNPFSTEFSTMADCLRHKNLVQLHGWCCEGSELVLVYEYLPNGSLDKILHRNSDPQFVLSWKQRLKIVLGVASALTYLHEQCESQVIHRDVKTCNIMLDEEFNPKLGDFGLAEVYQHSSIDREATVPAGTIGYLAPEYVFSGIPSVKTDVYSFGVVVLEVASGRKPVEDDGTVLVDQIWKLWERGRLMEGADPRLKKKYDAMEMERMLIVGLSCVNPNHEKRPTMKEAAKILRCESPLPVLPSRKPRMRIRSVDADDRLEESGERPSLDDAQWMTPRSHFSQK 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49774226 49776316 - Bda003630.1 Bda01g01389 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01389 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Bda01g01389 696 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 27 670 - -
Bda01g01389 696 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Bda01g01389 696 Gene3D Phosphorylase Kinase; domain 1 333 452 - -
Bda01g01389 696 SMART serkin_6 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01389 696 Pfam Legume lectin domain 31 263 IPR001220 GO:0030246
Bda01g01389 696 Gene3D Transferase(Phosphotransferase) domain 1 453 650 - -
Bda01g01389 696 ProSitePatterns Protein kinases ATP-binding region signature. 378 400 IPR017441 GO:0005524
Bda01g01389 696 MobiDBLite consensus disorder prediction 658 696 - -
Bda01g01389 696 CDD STKc_IRAK 378 645 - -
Bda01g01389 696 PANTHER - 27 670 - -
Bda01g01389 696 CDD lectin_legume_LecRK_Arcelin_ConA 33 262 IPR001220 GO:0030246
Bda01g01389 696 Pfam Protein kinase domain 373 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01389 696 ProSiteProfiles Protein kinase domain profile. 372 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01389 696 MobiDBLite consensus disorder prediction 660 680 - -
Bda01g01389 696 Gene3D - 21 263 - -
Bda01g01389 696 SUPERFAMILY Protein kinase-like (PK-like) 352 645 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01389 Bda-Chr1:49774226 Bda12g00968 Bda-Chr12:40858567 8.06E-132 dispersed
Bda01g01389 Bda-Chr1:49774226 Bda01g01434 Bda-Chr1:50272241 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69446 PF00069 Pkinase 1.10E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01389 - - zju:107421685 854.744