Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01394 | ATGGCGTTACAGAATATCGGGGCTTCTAACCGTGATGATGCGTTTTATAGATATAAGATGCCTAAAATGATTACCAAAATTGAAGGCAGAGGTAATGGCATCAAGACTAATGTGGTTAACATGGTTGAGATAGCGAAGGCATTGGCTAGGCCTGCTTCTTACACTACTAAGTTTTTTGGCTGTGAGCTTGGAGCACAGTCCAAGTTTGATGAAAAGACTGGCACTTCTTTGGTGAATGGCGCTCATGACACTGCAAAGCTTGCCAGTCTCCTTGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGGAACCCTGAAACTGAAGTTATCATAACAAAGACACAGATGATCCAACTGAAATGTGCTGCATGTGGGTTTGTCTCAGATGTTGACATGAGGTGCAAGCTTACGACATTTATTCTCAAGAATCCCCCTGAGTCTAAGAAGTCATCTAAAGACAAGAAAGCTATGAGGAGGGCTGAGAAGGAGCGACTTAAGGAGGGCGAGGCTGTTGATGAGGAGCAGAAGAAGCTGAAGAAAGAGGCAGTGAAGAAGAAAAGCACCTCTGGTAGCACAAAGGAAGTTGGGGTTTCCAGAACATCAAGTAAGAAGAGAAGTAATGGTTCTGATGAGGAACATTCTCCAGCTCACAGTCATTCTGATGATAATGACCAAGCAGATGGTGATGGTGACGATGACAATGATGTTCAGTGGCAGACAGACACATCATTGGAGGCTGCTAGGCAGCGTATCCAGGAGCAATTGAGTGCTGTTACCGCTGATATGGTGATGCTTACCTCTGAGGAAGAAAAGCAGAAGTCGAAGAAATCTCCAGAACAGGAAAAGGTATCTCAGTCTATTGGGCAGTTGAATGGAAATGGTGTCTCTACCCATGGAAAGCTTGTTAATGAAATAAAGGCGTACCTAAAAAATGGTTCTCCAGTAGCCCATCTCAAAGCGTTTTTGAATTCTTTGGCTGGTACTCCACAAGAAGTCATGGATGCCCTTTTCGAAGCACTATTTGAAGGTGCTGGAAAGGGTTTCTCTAAAGACGTGGTAAAAAAGAAGAGTTACCTTGCCGCAGCTGTACAAGAGGAGGGATCTCAGACAGTTCTGTTGGGTGCCATCGAGACCTTCTGTCTAAAGGCAAACCCTGAAGCCGCGCGAGAGGTGGCGCTGGTTTTGAAAGCCCTCTATGACAGTGATTTTTTAGAGGAAGAGTTTATAGTTGCGTGGTACCAGCAGGGCCTGAAAGGCAGCAATAAGAGTTCTCCGATGTGGAAGAATGTGAAACCCTTCATCGAGTGGCTGCAGAGTGCTGAGTCAGAGTCTGAAGACGAGTGA | 1350 | 45.04 | MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKFFGCELGAQSKFDEKTGTSLVNGAHDTAKLASLLENFIKKYVQCYGCGNPETEVIITKTQMIQLKCAACGFVSDVDMRCKLTTFILKNPPESKKSSKDKKAMRRAEKERLKEGEAVDEEQKKLKKEAVKKKSTSGSTKEVGVSRTSSKKRSNGSDEEHSPAHSHSDDNDQADGDGDDDNDVQWQTDTSLEAARQRIQEQLSAVTADMVMLTSEEEKQKSKKSPEQEKVSQSIGQLNGNGVSTHGKLVNEIKAYLKNGSPVAHLKAFLNSLAGTPQEVMDALFEALFEGAGKGFSKDVVKKKSYLAAAVQEEGSQTVLLGAIETFCLKANPEAAREVALVLKALYDSDFLEEEFIVAWYQQGLKGSNKSSPMWKNVKPFIEWLQSAESESEDE | 449 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 49856022 | 49857371 | + | Bda003637.1 | Bda01g01394 | 1394 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01394 | 449 | Pfam | Domain found in IF2B/IF5 | 11 | 127 | IPR002735 | GO:0003743|GO:0006413 | |
Bda01g01394 | 449 | MobiDBLite | consensus disorder prediction | 269 | 297 | - | - | |
Bda01g01394 | 449 | SUPERFAMILY | ARM repeat | 301 | 443 | IPR016024 | - | |
Bda01g01394 | 449 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 98 | 133 | IPR016190 | GO:0003743|GO:0006413 | |
Bda01g01394 | 449 | MobiDBLite | consensus disorder prediction | 147 | 239 | - | - | |
Bda01g01394 | 449 | MobiDBLite | consensus disorder prediction | 283 | 297 | - | - | |
Bda01g01394 | 449 | SMART | eIF2Bneu4 | 15 | 129 | IPR002735 | GO:0003743|GO:0006413 | |
Bda01g01394 | 449 | Coils | Coil | 159 | 179 | - | - | |
Bda01g01394 | 449 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 1 | 449 | - | - | |
Bda01g01394 | 449 | Gene3D | - | 105 | 145 | - | - | |
Bda01g01394 | 449 | MobiDBLite | consensus disorder prediction | 148 | 190 | - | - | |
Bda01g01394 | 449 | MobiDBLite | consensus disorder prediction | 200 | 226 | - | - | |
Bda01g01394 | 449 | CDD | W2_eIF5 | 298 | 447 | - | - | |
Bda01g01394 | 449 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 371 | 449 | IPR003307 | GO:0005515 | |
Bda01g01394 | 449 | Gene3D | - | 301 | 449 | - | - | |
Bda01g01394 | 449 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 449 | IPR045196 | GO:0003743|GO:0006413 | |
Bda01g01394 | 449 | SMART | 542_3 | 358 | 445 | IPR003307 | GO:0005515 | |
Bda01g01394 | 449 | Gene3D | - | 2 | 104 | - | - | |
Bda01g01394 | 449 | ProSiteProfiles | W2 domain profile. | 271 | 449 | IPR003307 | GO:0005515 | |
Bda01g01394 | 449 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 10 | 101 | IPR016189 | GO:0003743|GO:0006413 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g01181 | Bda-Chr8:47444145 | Bda01g01394 | Bda-Chr1:49856022 | 1.84E-08 | transposed | |
Bda01g01394 | Bda-Chr1:49856022 | Bda13g01519 | Bda-Chr13:38251523 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01394 | K03262 | - | mnt:21398051 | 632.484 |