Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01394 ATGGCGTTACAGAATATCGGGGCTTCTAACCGTGATGATGCGTTTTATAGATATAAGATGCCTAAAATGATTACCAAAATTGAAGGCAGAGGTAATGGCATCAAGACTAATGTGGTTAACATGGTTGAGATAGCGAAGGCATTGGCTAGGCCTGCTTCTTACACTACTAAGTTTTTTGGCTGTGAGCTTGGAGCACAGTCCAAGTTTGATGAAAAGACTGGCACTTCTTTGGTGAATGGCGCTCATGACACTGCAAAGCTTGCCAGTCTCCTTGAGAACTTCATCAAGAAATATGTTCAATGCTATGGTTGTGGGAACCCTGAAACTGAAGTTATCATAACAAAGACACAGATGATCCAACTGAAATGTGCTGCATGTGGGTTTGTCTCAGATGTTGACATGAGGTGCAAGCTTACGACATTTATTCTCAAGAATCCCCCTGAGTCTAAGAAGTCATCTAAAGACAAGAAAGCTATGAGGAGGGCTGAGAAGGAGCGACTTAAGGAGGGCGAGGCTGTTGATGAGGAGCAGAAGAAGCTGAAGAAAGAGGCAGTGAAGAAGAAAAGCACCTCTGGTAGCACAAAGGAAGTTGGGGTTTCCAGAACATCAAGTAAGAAGAGAAGTAATGGTTCTGATGAGGAACATTCTCCAGCTCACAGTCATTCTGATGATAATGACCAAGCAGATGGTGATGGTGACGATGACAATGATGTTCAGTGGCAGACAGACACATCATTGGAGGCTGCTAGGCAGCGTATCCAGGAGCAATTGAGTGCTGTTACCGCTGATATGGTGATGCTTACCTCTGAGGAAGAAAAGCAGAAGTCGAAGAAATCTCCAGAACAGGAAAAGGTATCTCAGTCTATTGGGCAGTTGAATGGAAATGGTGTCTCTACCCATGGAAAGCTTGTTAATGAAATAAAGGCGTACCTAAAAAATGGTTCTCCAGTAGCCCATCTCAAAGCGTTTTTGAATTCTTTGGCTGGTACTCCACAAGAAGTCATGGATGCCCTTTTCGAAGCACTATTTGAAGGTGCTGGAAAGGGTTTCTCTAAAGACGTGGTAAAAAAGAAGAGTTACCTTGCCGCAGCTGTACAAGAGGAGGGATCTCAGACAGTTCTGTTGGGTGCCATCGAGACCTTCTGTCTAAAGGCAAACCCTGAAGCCGCGCGAGAGGTGGCGCTGGTTTTGAAAGCCCTCTATGACAGTGATTTTTTAGAGGAAGAGTTTATAGTTGCGTGGTACCAGCAGGGCCTGAAAGGCAGCAATAAGAGTTCTCCGATGTGGAAGAATGTGAAACCCTTCATCGAGTGGCTGCAGAGTGCTGAGTCAGAGTCTGAAGACGAGTGA 1350 45.04 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKFFGCELGAQSKFDEKTGTSLVNGAHDTAKLASLLENFIKKYVQCYGCGNPETEVIITKTQMIQLKCAACGFVSDVDMRCKLTTFILKNPPESKKSSKDKKAMRRAEKERLKEGEAVDEEQKKLKKEAVKKKSTSGSTKEVGVSRTSSKKRSNGSDEEHSPAHSHSDDNDQADGDGDDDNDVQWQTDTSLEAARQRIQEQLSAVTADMVMLTSEEEKQKSKKSPEQEKVSQSIGQLNGNGVSTHGKLVNEIKAYLKNGSPVAHLKAFLNSLAGTPQEVMDALFEALFEGAGKGFSKDVVKKKSYLAAAVQEEGSQTVLLGAIETFCLKANPEAAREVALVLKALYDSDFLEEEFIVAWYQQGLKGSNKSSPMWKNVKPFIEWLQSAESESEDE 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 49856022 49857371 + Bda003637.1 Bda01g01394 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01394 449 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Bda01g01394 449 MobiDBLite consensus disorder prediction 269 297 - -
Bda01g01394 449 SUPERFAMILY ARM repeat 301 443 IPR016024 -
Bda01g01394 449 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Bda01g01394 449 MobiDBLite consensus disorder prediction 147 239 - -
Bda01g01394 449 MobiDBLite consensus disorder prediction 283 297 - -
Bda01g01394 449 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Bda01g01394 449 Coils Coil 159 179 - -
Bda01g01394 449 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 449 - -
Bda01g01394 449 Gene3D - 105 145 - -
Bda01g01394 449 MobiDBLite consensus disorder prediction 148 190 - -
Bda01g01394 449 MobiDBLite consensus disorder prediction 200 226 - -
Bda01g01394 449 CDD W2_eIF5 298 447 - -
Bda01g01394 449 Pfam eIF4-gamma/eIF5/eIF2-epsilon 371 449 IPR003307 GO:0005515
Bda01g01394 449 Gene3D - 301 449 - -
Bda01g01394 449 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 449 IPR045196 GO:0003743|GO:0006413
Bda01g01394 449 SMART 542_3 358 445 IPR003307 GO:0005515
Bda01g01394 449 Gene3D - 2 104 - -
Bda01g01394 449 ProSiteProfiles W2 domain profile. 271 449 IPR003307 GO:0005515
Bda01g01394 449 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01181 Bda-Chr8:47444145 Bda01g01394 Bda-Chr1:49856022 1.84E-08 transposed
Bda01g01394 Bda-Chr1:49856022 Bda13g01519 Bda-Chr13:38251523 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01394 K03262 - mnt:21398051 632.484