Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01404 | ATGGGTTCTCTTTCGACTGAGAGTTCGAATGTGGAGAAAGAAGGAAGCCATGTTGTTGGCGATGAAGGAACTGGTAGAGCCGAGAAGCTTCAATGGCTTCTGGATAGTCCAGAACCTCCCTCTATGTGGCATGAGTTCATTGGTTGTCTCAAAGAAGCTTTCGTTCCTCGTAGCAACAGACCTTCTTCTTCAGAGAAGCAGAAAGTATCTCTGCGTGTTTTTTCAGTCTTGCGAGGTGTTTTTCCGATTCTTAGTTGGGGAAGAAACTACAATGCTTCCAAGTTTCGGAGTGATCTAATGGCCGGTTTAACTCTAGCCAGCCTTAGCATTCCTCAGGTTCTCACTCTCTCTAACTCTTTCTCACTCTCTCTAACTCTTTCTTTCTCTCTCTATAATTATGATGTTTTGCAGAGTATTGGGTATGCTAATTTGGCAAAGCTTGATCCACAGTATGGTTTATACACAAGCGTCGTTCCGCCATTGATCTATTCATTACTGGGAAGTTCAAGAGAGCTAGCAATAGGACCAGTGGCTGTGGTTTCTTTGCTTTTATCCTCCATGCTTGGGAAAATTCAAGACCCTTTTGCAGACCCGATTGCCTACAGAAAACTCGTCTTCACCGTCACTTTCTTTGCTGGATCATTTCAAGCAGCGTTTGGATTATTTAGGTTGGGGTTTTTGGTGAATTTTCTTTCGCATGCTGCAATTGTTGGATTCATGGGAGGAGCCGCCATTGTTATAGGCCTTCAACAGCTCAAAGGTCTTCTGGGTATCACTCATTTTTCCAGCAGCACAGATATTATCTCTGTCTTGCACTCTGTTCTTCAATCTTTTCACCACTCATGGTACCCTCTGAATTTTGTTCTTGGCTGTTCATTCTTCATCTTCCTTCTACTGGCGAGATTCATTGGAAGAAGAAACAAAAAGCTGTTCTGGCTACCAGCAATTGCTCCATTATTATCAGTTATATTATCGACCCTAATCGTGTTTTTGACAAAAGCTGATAAACATGGAGTTAAAATTGTGAAACATATTGATAGAGGTGTAAATCGCAGCTCGGTTCATCAGCTACAACTTCACAGCCCTCACGTAGGGCAAGCTGCAAAAATTGGCCTGATTTCTGCCCTCATCGCTCTCACTGAAGCTATTGCAGTGGGAAGATCTTTTGCTTCCATCAATGGCTACCACCTTGATGGTAATAAGGAAATGGTGGCCATGGGGTTCATGAACATCGTAGGCTCTTTCACTTCTTGTTATGTTGCCACTGGTTCTTTTTCGAGGACTGCAGTGAATTTCAGCGCTGGATGTGAGACGGTGGTGTCGAACGTAGCAATTTCATTTGCGAAGATATTACTCAATTTTATTCGACCCGACATTGAACTGGTCGGAAAACTACCAACAAGTGATATCTTCTGTAACGTCCGGCAATACCCTATGGCTACAAAAACTCGAGGCATTATCATTATTCGAATTGACACTGGATTCCTTTGTTTTGCTAATGCTAATTTTATTAGAGATAAGGTTTTGAGATGGATTGAAGAAGAAGAAGAAAAAGAAAAAGACGGTGATGTTATTGCTAGCGTGATGAATGTGGATACTTCGGGAATTATCGCATTGGAGGAACTACATAGGAAGCTTATTTCCATTGGCGTAGAATTAAATATAGCAAACCCAAGATGGGAAGTGATTCACAAGCTGAGGATGGTTAAGTTCATAGACAGAATTGGAGGCAGAGTTTTTGGGTCTGTTGCTGAAGCTGTCCAAGCTTGTTCTCCGCCTAAATTGCCTACCTGA | 1794 | 42.31 | MGSLSTESSNVEKEGSHVVGDEGTGRAEKLQWLLDSPEPPSMWHEFIGCLKEAFVPRSNRPSSSEKQKVSLRVFSVLRGVFPILSWGRNYNASKFRSDLMAGLTLASLSIPQVLTLSNSFSLSLTLSFSLYNYDVLQSIGYANLAKLDPQYGLYTSVVPPLIYSLLGSSRELAIGPVAVVSLLLSSMLGKIQDPFADPIAYRKLVFTVTFFAGSFQAAFGLFRLGFLVNFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFSSSTDIISVLHSVLQSFHHSWYPLNFVLGCSFFIFLLLARFIGRRNKKLFWLPAIAPLLSVILSTLIVFLTKADKHGVKIVKHIDRGVNRSSVHQLQLHSPHVGQAAKIGLISALIALTEAIAVGRSFASINGYHLDGNKEMVAMGFMNIVGSFTSCYVATGSFSRTAVNFSAGCETVVSNVAISFAKILLNFIRPDIELVGKLPTSDIFCNVRQYPMATKTRGIIIIRIDTGFLCFANANFIRDKVLRWIEEEEEKEKDGDVIASVMNVDTSGIIALEELHRKLISIGVELNIANPRWEVIHKLRMVKFIDRIGGRVFGSVAEAVQACSPPKLPT | 597 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 49943944 | 49948484 | - | Bda003646.1 | Bda01g01404 | 1404 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01404 | 597 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda01g01404 | 597 | ProSitePatterns | SLC26A transporters signature. | 149 | 170 | IPR018045 | GO:0008271|GO:0008272 | |
Bda01g01404 | 597 | ProSiteProfiles | STAS domain profile. | 494 | 590 | IPR002645 | - | |
Bda01g01404 | 597 | SUPERFAMILY | SpoIIaa-like | 482 | 590 | IPR036513 | - | |
Bda01g01404 | 597 | PANTHER | LOW AFFINITY SULFATE TRANSPORTER 3-LIKE | 125 | 444 | - | - | |
Bda01g01404 | 597 | PANTHER | LOW AFFINITY SULFATE TRANSPORTER 3-LIKE | 443 | 595 | - | - | |
Bda01g01404 | 597 | PANTHER | LOW AFFINITY SULFATE TRANSPORTER 3-LIKE | 19 | 120 | - | - | |
Bda01g01404 | 597 | Pfam | STAS domain | 477 | 586 | IPR002645 | - | |
Bda01g01404 | 597 | Gene3D | STAS domain | 456 | 592 | IPR036513 | - | |
Bda01g01404 | 597 | PANTHER | SULFATE TRANSPORTER | 125 | 444 | IPR001902 | GO:0015301|GO:0016020|GO:0055085 | |
Bda01g01404 | 597 | PANTHER | SULFATE TRANSPORTER | 443 | 595 | IPR001902 | GO:0015301|GO:0016020|GO:0055085 | |
Bda01g01404 | 597 | PANTHER | SULFATE TRANSPORTER | 19 | 120 | IPR001902 | GO:0015301|GO:0016020|GO:0055085 | |
Bda01g01404 | 597 | CDD | STAS_SulP_like_sulfate_transporter | 477 | 580 | - | - | |
Bda01g01404 | 597 | Pfam | Sulfate permease family | 133 | 447 | IPR011547 | GO:0016021 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01404 | Bda-Chr1:49943944 | Bda03g00504 | Bda-Chr3:4272633 | 1.24E-30 | dispersed | |
Bda01g01404 | Bda-Chr1:49943944 | Bda03g00872 | Bda-Chr3:7564021 | 2.14E-23 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01404 | K17469 | - | cit:102620800 | 628.246 |