Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01422 ATGGCCAAACCTTACTGTAACGCCATGGCTGTTAATATAATTCTGCCTCTGCTCCTTTCATTCCCTTTGCTTCACTCTTACGCTCTGGACCTTAACGATGACTCTCATGATTCCCCCATTTCTCGCTTCCAGCGCTATCTCAGAATCAACACTGCCCACCCCAATCCTGATTACTCTTCTGCTGTCTCCTTCCTCAACTCCCAAGCACTCTCTCTTGGCCTCCATAGCCAGACGCTGGAGTTCGCTTCTGGGAAACCCCTTCTTCTCTTAACCTGGTATGGCTCCGACCCTTCTCTACCTTCTATTTTGCTCAACTCTCACATCGATTCCGTCCCCGCCGAGCCTTCCAAGTGGCTACACCCTCCCTTCTCCGCGTTTTTATCGTCCGACGGAAAGATTTTTGCCCGGGGTTCACAGGATGACAAGTGTATTGGCATTCAATACCTCGAGGCAATCCGAAACCTGAAACGACGCAATTTCGCTCCACTCCGAACGATTCATGTTTCATATGTGCCAGACGAGGAGATTGGTGGCCTCGACGGGGCTATGAAGTTCACCGCCTCGAAGCATTTCAAGGATTTGATTATCGGTTTTTTATTGGACGAAGGTCAGGCTTCTCTCAACGATGAGTTTCGCGTCTTCTATGCGGATAGAACTCCATGGGGGCTGAAAATTAAAGCCAATGGAGCACCAGGGCATGGTTCCAGAATGTACGACAACAGTGCAATGGAGAATTTGATGAAGAGCATTGAGGTTGTGAGTAAGTTTAGGGAGAGTCAATTTGATATTGTTAAGGCGGGTGAAGCTGCCAATTCGGAGGTTATCTCAGTCAATTCTGTCTATGTCAATGCCGGAATTCCCTCTCCTACTGGTTTTGTGATGAATATGCAACCTTCTGAAGCAGAAGCAGGTTTTGATCTCAGATTGCCTCCCATGGCAGACCCGGATCTTATTAAAAGAAGAATTGCAGAAGAATGGGCTCCAGCCCGAAGGAACATGACATTCCAGATTATTGAAAAGGGTCCCATGAGAGACAATATGGGGCATCCCTTAATGACAGCTACGAATAACTCTAATCCATGGTGGCCCGTTTTTGAGAAAGCAATCAAAGATGCAGGAGGAAAGCTTTCTAAGCCTGAAATCCTTGCTTCCACTACAGATGCTCGGTACGTGAGACAGTTGGGAATTCCTGCGCTCGGCTTTTCACCAATGAAGAATACTCCAATTTTACTTCATGACCACAACGAGTTCCTCACAGATACCATCTTCTTGGAGGGCATAAAGGTTTATGAATCCATAATCAGTGCTTTGAGTTCCTTCAAAGAAACATCTTAA 1335 46.67 MAKPYCNAMAVNIILPLLLSFPLLHSYALDLNDDSHDSPISRFQRYLRINTAHPNPDYSSAVSFLNSQALSLGLHSQTLEFASGKPLLLLTWYGSDPSLPSILLNSHIDSVPAEPSKWLHPPFSAFLSSDGKIFARGSQDDKCIGIQYLEAIRNLKRRNFAPLRTIHVSYVPDEEIGGLDGAMKFTASKHFKDLIIGFLLDEGQASLNDEFRVFYADRTPWGLKIKANGAPGHGSRMYDNSAMENLMKSIEVVSKFRESQFDIVKAGEAANSEVISVNSVYVNAGIPSPTGFVMNMQPSEAEAGFDLRLPPMADPDLIKRRIAEEWAPARRNMTFQIIEKGPMRDNMGHPLMTATNNSNPWWPVFEKAIKDAGGKLSKPEILASTTDARYVRQLGIPALGFSPMKNTPILLHDHNEFLTDTIFLEGIKVYESIISALSSFKETS 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50158331 50161083 - Bda003667.1 Bda01g01422 1422

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01422 444 PANTHER AMINOACYLASE-1 26 443 - -
Bda01g01422 444 Gene3D Zn peptidases 30 222 - -
Bda01g01422 444 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 35 440 IPR010159 GO:0004046|GO:0005737|GO:0006520
Bda01g01422 444 SUPERFAMILY Bacterial exopeptidase dimerisation domain 223 328 IPR036264 -
Bda01g01422 444 Pfam Peptidase family M20/M25/M40 103 435 IPR002933 GO:0016787
Bda01g01422 444 CDD M20_AcylaseI_like 37 438 - -
Bda01g01422 444 Gene3D - 359 440 - -
Bda01g01422 444 SUPERFAMILY Zn-dependent exopeptidases 30 437 - -
Bda01g01422 444 Gene3D - 223 332 - -
Bda01g01422 444 PANTHER PUTATIVE-RELATED 26 443 - -
Bda01g01422 444 PIRSF ACY-1 30 442 - -
Bda01g01422 444 Pfam Peptidase dimerisation domain 220 324 IPR011650 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01422 K14677 ACY1; aminoacylase [EC:3.5.1.14] - vvi:100257526 680.248
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01422 Bda-Chr1:50158331 Bda13g00565 Bda-Chr13:6616436 0 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g289 . . . . . . . . Cmo04g02462 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00187 . Bda01g01422 Bpe02g01636 . Bma01g00825 . . . . . . Car04g02280 . Cpe01g02042 . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010544 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 3 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda01g01422 Bda_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0