Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01446 | ATGTCGACCCAGAATCGCCGTTCGTCGTTTTCGTCCTCCACGTCGTCTTCATTGGCGAAGAGGCAAGCGCCGTCGGAGAATATGGGGAAGGCTGCGGCGGTTCCGACTCATCTCGCAAAGAAGCGGGCGCCTCTCGGAAACATCACCAATTTGAAGGGTGCTCCCGTCCCTTCTTCTACTATGGCACCGCATACAACAAAAATTTCCAAGGGTAAGAAATGTTCCCCTGCAGGAAATGGCAGCCCAACCTTACAAGGAAGTCAGCTGCCTGCAATGGTTAATGTTAAATCTACTTCAACATTTCCTCTCAAACCTACAACTTTCCCAAAATGTGAAGTGATCATCCCTTCCCCAGCAGTGATCCCACCTCCTAGCAGCATGGATGTTTCTCCAAGTAAATCAGATGGAAGTTCAGTTTCTTTGGATGAGACAATGTCTACTTCTGATTCCTTTAAGAGTCCTGAAGTTGAGTACTTAGACAACAATGATGTACCCACTGTCGATACTATCGAGAGGAAAGCATTAAGCAATCTCTACATTTCAGACCATCAAGTAGACAAAACTGATGGGAATCTTTGCAATAGAGATATGCTTTTTGACCTTCAGAGAGACGGGAAATTTGTGGATATTGATAATAACTACGAAGATCCACAGATGTGTGCTACCATTGCTTGTGATATTTACAAGCATTTGCGCGCATCGGAGGCAAAGAAAAGGCCTTCCACTGATTTCATGGAGAGGATTCAGAAGGATATAAGTGCTAACATGCGTGCCATTTTAATCGATTGGCTTGTGGAGGTAGCTGAAGAATACAGATTAATCCCCGATACGCTCTATTTGACTGTAAATTACATTGATCGATATCTCTCTGGTAATGCAATGGACAGACAAAGATTACAGCTGCTTGGGGTTGCCTCCATGATGATTGCTTCGAAGTATGAGGAGATATGTGCGCCACAAGTGGAAGAATTTTGTTATATTACGGACAATACATATTTTAAGGAAGAGGTATTGCAAATGGAATCATCTATGTTGAACTACTTGAAGTTTGAAATGACTGCACCAACAACTAAGTGTTTTCTAAGGCGATTTGTTCGTGTTGCTCAAGGGATAGATGAGGTTCCATCAATGCAAATAGAATGCTTAGCTAACTACCTTGCCGAGCTGTCGCTTATCGAATACAGCATGCTCGTTTATTCTCCGTCACTCATTGCCGCTTCAGCCATTTTCTTGGCGAAGTTCATCCTCTGTCCGACTAAGAGACCATGGAACTCCATATTGCAGCATTACACTCTTTACCAGCCTTGTGATCTGAGAGACTGCGTAAAGAACTTGCATAGACTGTGTTGTCGCACTCCAACTTCTAGCCTACCAGCCATTAGAGAGAAATACAGCCAACACAAGTACAAACAGGTGGCTAGAAAACACTGTCCTCCAGTCTTACCTTCTGAGTTTTTCTACAATGAAATCCAA | 1473 | 43.52 | MSTQNRRSSFSSSTSSSLAKRQAPSENMGKAAAVPTHLAKKRAPLGNITNLKGAPVPSSTMAPHTTKISKGKKCSPAGNGSPTLQGSQLPAMVNVKSTSTFPLKPTTFPKCEVIIPSPAVIPPPSSMDVSPSKSDGSSVSLDETMSTSDSFKSPEVEYLDNNDVPTVDTIERKALSNLYISDHQVDKTDGNLCNRDMLFDLQRDGKFVDIDNNYEDPQMCATIACDIYKHLRASEAKKRPSTDFMERIQKDISANMRAILIDWLVEVAEEYRLIPDTLYLTVNYIDRYLSGNAMDRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSMLNYLKFEMTAPTTKCFLRRFVRVAQGIDEVPSMQIECLANYLAELSLIEYSMLVYSPSLIAASAIFLAKFILCPTKRPWNSILQHYTLYQPCDLRDCVKNLHRLCCRTPTSSLPAIREKYSQHKYKQVARKHCPPVLPSEFFYNEIQ | 491 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 50385131 | 50388178 | + | Bda032953 | Bda01g01446 | 1446 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01446 | 491 | Gene3D | - | 226 | 473 | - | - | |
Bda01g01446 | 491 | CDD | CYCLIN | 256 | 345 | IPR013763 | - | |
Bda01g01446 | 491 | PANTHER | CYCLIN-A1-1 | 30 | 488 | - | - | |
Bda01g01446 | 491 | SMART | cyclin_7 | 359 | 447 | IPR013763 | - | |
Bda01g01446 | 491 | SMART | cyclin_7 | 262 | 346 | IPR013763 | - | |
Bda01g01446 | 491 | PANTHER | CYCLINS | 30 | 488 | IPR039361 | - | |
Bda01g01446 | 491 | Gene3D | - | 240 | 353 | - | - | |
Bda01g01446 | 491 | MobiDBLite | consensus disorder prediction | 127 | 153 | - | - | |
Bda01g01446 | 491 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bda01g01446 | 491 | MobiDBLite | consensus disorder prediction | 76 | 90 | - | - | |
Bda01g01446 | 491 | MobiDBLite | consensus disorder prediction | 52 | 66 | - | - | |
Bda01g01446 | 491 | CDD | CYCLIN | 353 | 446 | IPR013763 | - | |
Bda01g01446 | 491 | MobiDBLite | consensus disorder prediction | 119 | 153 | - | - | |
Bda01g01446 | 491 | MobiDBLite | consensus disorder prediction | 1 | 90 | - | - | |
Bda01g01446 | 491 | PIRSF | Cyclin_A_B_D_E | 1 | 487 | IPR039361 | - | |
Bda01g01446 | 491 | SUPERFAMILY | Cyclin-like | 355 | 479 | IPR036915 | - | |
Bda01g01446 | 491 | Pfam | Cyclin, C-terminal domain | 355 | 475 | IPR004367 | - | |
Bda01g01446 | 491 | SUPERFAMILY | Cyclin-like | 215 | 352 | IPR036915 | - | |
Bda01g01446 | 491 | SMART | Cyclin_C_2 | 355 | 479 | IPR004367 | - | |
Bda01g01446 | 491 | Pfam | Cyclin, N-terminal domain | 226 | 352 | IPR006671 | - | |
Bda01g01446 | 491 | ProSitePatterns | Cyclins signature. | 257 | 288 | IPR006671 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00581 | Bda-Chr1:32830373 | Bda01g01446 | Bda-Chr1:50385131 | 1.65E-102 | dispersed | |
Bda01g00725 | Bda-Chr1:34532308 | Bda01g01446 | Bda-Chr1:50385131 | 6.92E-103 | dispersed | |
Bda01g01446 | Bda-Chr1:50385131 | Bda13g01473 | Bda-Chr13:37627034 | 2.62E-17 | dispersed | |
Bda11g00693 | Bda-Chr11:6914682 | Bda01g01446 | Bda-Chr1:50385131 | 9.10E-52 | dispersed | |
Bda01g01446 | Bda-Chr1:50385131 | Bda01g01454 | Bda-Chr1:50454887 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01446 | K06627 | - | qsu:112028095 | 685.641 |