Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01451 | ATGAATGCATATTATGTGCGAGGATGTTACTTAAATCTTCGATTTGCTTGTGGGATCTGTGATACTCTTCATGTGTCAACTATTAAAATAATTACTGACAACTTTAAAATTTATGGCGCAAAAGCCTCAGTGAAGTTGGTATTGTTAGACGAGGCAGATGCAATGACAGTGCCTAGAAGGCCCATGTCAACACACATGGCTTCTAATCAGATAACAGAAGAAGCTGTCTACTTGTGCACTGGAAATCCAATGCCCAAGGACATAGAGCAAATATCTTACTGGCTTCTGAATGAACCATTTGCAGAAAGTTTTAGAAGAATATCTGAAATCAAGACAAAGAAAGGATTGGCCCTGGTTGATATTGTGAGAGAAGTGACCATGTTCGTTTTTAAAATAAAGATGCCGTCAGATGTTCGAGTTCAATTGATAAATGATTTAGCTGACATTGTGTATGTATCTATGTCAACCTTTACTCTTTTACCTTCACTATTTGGCTTGCAACTAGGATCCCTTATTGCTACCTTCACACAAGCTCGATCTGCACTAGTTAGTGCCGCAAAGTAA | 564 | 38.3 | MNAYYVRGCYLNLRFACGICDTLHVSTIKIITDNFKIYGAKASVKLVLLDEADAMTVPRRPMSTHMASNQITEEAVYLCTGNPMPKDIEQISYWLLNEPFAESFRRISEIKTKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIVYVSMSTFTLLPSLFGLQLGSLIATFTQARSALVSAAK | 187 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 50441783 | 50445981 | + | Bda003697.1 | Bda01g01451 | 1451 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01451 | 187 | Pfam | Replication factor C C-terminal domain | 83 | 149 | IPR013748 | - | |
Bda01g01451 | 187 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 83 | 152 | IPR008921 | GO:0003677|GO:0006260 | |
Bda01g01451 | 187 | PANTHER | REPLICATION FACTOR C SUBUNIT 5 | 63 | 183 | - | - | |
Bda01g01451 | 187 | Gene3D | - | 83 | 185 | - | - | |
Bda01g01451 | 187 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 63 | 183 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01451 | Bda-Chr1:50441783 | Bda13g01478 | Bda-Chr13:37675193 | 2.22E-66 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01451 | K10756 | - | tcc:18592371 | 192.971 |