Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01451 ATGAATGCATATTATGTGCGAGGATGTTACTTAAATCTTCGATTTGCTTGTGGGATCTGTGATACTCTTCATGTGTCAACTATTAAAATAATTACTGACAACTTTAAAATTTATGGCGCAAAAGCCTCAGTGAAGTTGGTATTGTTAGACGAGGCAGATGCAATGACAGTGCCTAGAAGGCCCATGTCAACACACATGGCTTCTAATCAGATAACAGAAGAAGCTGTCTACTTGTGCACTGGAAATCCAATGCCCAAGGACATAGAGCAAATATCTTACTGGCTTCTGAATGAACCATTTGCAGAAAGTTTTAGAAGAATATCTGAAATCAAGACAAAGAAAGGATTGGCCCTGGTTGATATTGTGAGAGAAGTGACCATGTTCGTTTTTAAAATAAAGATGCCGTCAGATGTTCGAGTTCAATTGATAAATGATTTAGCTGACATTGTGTATGTATCTATGTCAACCTTTACTCTTTTACCTTCACTATTTGGCTTGCAACTAGGATCCCTTATTGCTACCTTCACACAAGCTCGATCTGCACTAGTTAGTGCCGCAAAGTAA 564 38.3 MNAYYVRGCYLNLRFACGICDTLHVSTIKIITDNFKIYGAKASVKLVLLDEADAMTVPRRPMSTHMASNQITEEAVYLCTGNPMPKDIEQISYWLLNEPFAESFRRISEIKTKKGLALVDIVREVTMFVFKIKMPSDVRVQLINDLADIVYVSMSTFTLLPSLFGLQLGSLIATFTQARSALVSAAK 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50441783 50445981 + Bda003697.1 Bda01g01451 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01451 187 Pfam Replication factor C C-terminal domain 83 149 IPR013748 -
Bda01g01451 187 SUPERFAMILY post-AAA+ oligomerization domain-like 83 152 IPR008921 GO:0003677|GO:0006260
Bda01g01451 187 PANTHER REPLICATION FACTOR C SUBUNIT 5 63 183 - -
Bda01g01451 187 Gene3D - 83 185 - -
Bda01g01451 187 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 63 183 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01451 Bda-Chr1:50441783 Bda13g01478 Bda-Chr13:37675193 2.22E-66 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01451 K10756 - tcc:18592371 192.971