Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01455 ATGAATTCTATCTTCCTTCTCTTTCTCTTTCCTACTTTTTCCTATTTCTTTTTTGTTTCAATACAACTCTCTGCCGCAGCTGCTGACCATGGCGCCAATTTCCCCAGCTCCAGCATCGTCTTCGCGACGCTCGGTCGATCAAACTACGCCTTTGACATCTTCGCCCTTCCTGCTCTGGGAAACCCTTCAATTTCCGAAGAAATTCAGATCACTGACGGAGAGTCTGTCAATTTCAATGGCCACTTCCCTTCTTCTTCATCAATCTCTGCGATGATGTCGCTTTTCGATAACCAAACCCAACTTCCACCCGACCCGACATCATTGCCACTCGTCTATGTCACGGAGAGAAACGGATCCTTTAACATTTTCCTTGATGCTGTTTCCTTGGGAACTCCGAGAAGCGCGAGAAAACGATCTGATTTCGAACTTCCAGCTCGATTTCAGGTTCCCCTGTTGAGCAAAAATGGAGTTTTTAAAGACAAGCCGACAGTTAACGGTGATTATTTGGTCTATGTTTCTACTCATGAAAACACGACCGAGCCGAGGAAGAGTTGGGCGGCAGTTTACTCAACCAATTTGAAATTACGTCTGACTCGAAGATTGACCCCCTATGGCGTCGCTGATTTCAGTCCCTCCGTCTCGCCGTCTGGGAGGTGGACGGCGGTGGCTTCTTACGGCCAAAGTGGTTGGAACGGTGATGTCGAGGACCTAAGCACAGATATATTCGTTTTCCTGACTCGGGATGGAGCTCAGCGAGTTAAAGTTGTTGAACACGGCGGCTGGCCTTGCTGGGCGGATGAATCCACCTTATATTTTCACCGGCGAGGGTCTGATCAGTGGTGGAGTATATACAGAGCGACTCTTCCAAAACAAGGTCTAGTTTCTACCGTGTCAGTTGTGATTGAGCGAGTCACCCCACCGGGTTTGCACGCTTTCACTCCAGCTACTTCTCATCAAAACAAGAACTTTATAGCTGTAGCTACGAGACGATCCACTTCCGATTACCGCCATATCGAGCTGTTCGACATCGTGACCGGTGAGTTTGAGGAGCTGACTCGGCTCGTTTCTCCCAAAACTCATCACTATAACCCTTTCATCTCCCCCGATTCAACTCTTATCGGTTACCACAAGTGCAGAGGTGAAGGAATTGGAAGAAAAAGCTCCAAGCTCTTGCTGGAAAATATTCAAACCCCCATCCCCGGCGTTTCTTTATTCAGAATCGATGGTTCCTTCCCGTCTTTCTCGCCAACAGGCAATCGTATCGCCTACGTCAACTTCCCCGGCGCTTACGTCGTAAATTCCGACGGTTCAAACCGGCGACAGATTTTCTCTCAAACCGCCTTCTCGACCGCATGGGATCCAGTGCGCAAAGGAGTTGTGTACACCAGCACTGGGCCAACCTTTGCTTCGGAGAGTACCGACGTAGATGTTATCTCCATCAACGTTGACGACGATGACCAACTGAGTTTCAAAACGTTGACCACTAACGGCAAAAATAACGCTTTTCCTTCTCCGTCACCAGATGGAAAATGGGTCGTGTTTCGCTCGGGTCGGACGGGTCATAAGAATCTATACATAATGGACGCAGTAGAGGGAGAACGGCGCCAGCTCCACCGCCTTACAGAGGGTCCTTGGACGGACACAATGTGTAATTGGTCACCCGACGGTGACTTCATCGCATTTGCATCGGACCGGGACAACCCGGGAAGTGGGAGTTTCGAAATATACTTGATCCACCCGAATAAAACCGGGTTAAGGAAGTTAATTCAAAGCGGGTCAAATGGCAGGACCAACCACCCATGGTTCAGCCCGGATTCAAAAACTGTAGTCTTCACGTCGGACTACGCAGGCATATCGGCGGAGCCAATCTCAAACGCACATCATTACCAGCCTTACGGTGAGATCTTCACAGTAAAACTGGACGGCTCTGATCTCAGGAGATTGACTCACAATTCCTACGAGGATGGGACTCCAACGTGGGGGCCACGTCACCTCAAGGATGTTGACGTGGAGAGATCGAAAGCTGGGCCCCGTTGCCAATTTGAAGACTGTCACTGGCTTAAAGCTTCAGTCTCAAGAAAGTTAAACTGCGGTACGTGA 2100 49.43 MNSIFLLFLFPTFSYFFFVSIQLSAAAADHGANFPSSSIVFATLGRSNYAFDIFALPALGNPSISEEIQITDGESVNFNGHFPSSSSISAMMSLFDNQTQLPPDPTSLPLVYVTERNGSFNIFLDAVSLGTPRSARKRSDFELPARFQVPLLSKNGVFKDKPTVNGDYLVYVSTHENTTEPRKSWAAVYSTNLKLRLTRRLTPYGVADFSPSVSPSGRWTAVASYGQSGWNGDVEDLSTDIFVFLTRDGAQRVKVVEHGGWPCWADESTLYFHRRGSDQWWSIYRATLPKQGLVSTVSVVIERVTPPGLHAFTPATSHQNKNFIAVATRRSTSDYRHIELFDIVTGEFEELTRLVSPKTHHYNPFISPDSTLIGYHKCRGEGIGRKSSKLLLENIQTPIPGVSLFRIDGSFPSFSPTGNRIAYVNFPGAYVVNSDGSNRRQIFSQTAFSTAWDPVRKGVVYTSTGPTFASESTDVDVISINVDDDDQLSFKTLTTNGKNNAFPSPSPDGKWVVFRSGRTGHKNLYIMDAVEGERRQLHRLTEGPWTDTMCNWSPDGDFIAFASDRDNPGSGSFEIYLIHPNKTGLRKLIQSGSNGRTNHPWFSPDSKTVVFTSDYAGISAEPISNAHHYQPYGEIFTVKLDGSDLRRLTHNSYEDGTPTWGPRHLKDVDVERSKAGPRCQFEDCHWLKASVSRKLNCGT 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 50458284 50460383 - Bda003701.2 Bda01g01455 1455

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01455 699 Gene3D - 396 571 IPR011042 -
Bda01g01455 699 SUPERFAMILY Tricorn protease N-terminal domain 321 592 - -
Bda01g01455 699 Pfam WD40-like Beta Propeller Repeat 551 576 IPR011659 -
Bda01g01455 699 Pfam WD40-like Beta Propeller Repeat 492 526 IPR011659 -
Bda01g01455 699 Gene3D - 161 395 IPR011042 -
Bda01g01455 699 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 33 683 - -
Bda01g01455 699 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 33 683 - -
Bda01g01455 699 SUPERFAMILY DPP6 N-terminal domain-like 593 662 - -
Bda01g01455 699 SUPERFAMILY Tricorn protease N-terminal domain 163 347 - -
Bda01g01455 699 Gene3D - 593 665 IPR011042 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01455 - - - qlo:115960256 996.882
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01455 Bda-Chr1:50458284 Bda13g01031 Bda-Chr13:12065371 9.92E-07 dispersed
Bda01g01447 Bda-Chr1:50388530 Bda01g01455 Bda-Chr1:50458284 0 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g228 . . . . . . . . . Cmo15g00667 . . . . Sed03g0428 . . Bhi04g01877 Tan11g1249 Cmetu03g0593 . Hepe02g2220 . Lcy10g1246 Cla08g00617 Cam08g1031 Cec08g0620 Cco08g0732 Clacu08g0741 . Cre08g0549 . . Cone17ag0825 . . . . . . Blo18g00176 . Bda01g01455 Bpe02g01652 . Bma01g00803 . . . . . . . Car15g00607 . . . . . . . . . . . . . . . . Lsi08g00457 . Chy03g00761 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008521 3 1 1 3 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda01g01455 Bda_Chr01 FPKM 8.428983 9.783489 9.465414 11.283571 1.616752 1.572538 2.151291 0.546115 0.430627