Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01518 ATGGCGGATTCTAGCTCTGCTCCGGCACGGAGAATGTGGTGTTCAGTGCCGGAAAAGATTCAACTGCACGGCGCTATGCTGGCGTTGCAGTTTGGCTATGCCGGATTTCACGTAGTTTCAAGATTTGCACTTAATATGGGCATCAGTAAACTCGTCTTCCCAGTTTACAGAAACATCATCGCTTTGATTCTTCTCGTTCCATTTGCATATTTCCTCGAAAAGAAGGAGCGGCCACCCATTTCTCTAAATTTCCTCCTCCAGTTCTTCTTCCTCGCCCTCGTTGGAATCACAGCAAATCAAGGATTCTACTTGCTGGGTTTAGACAATACCTCCCCAACTTTTGCATCTGCAATACAGAACTCCGTACCGGCCATCACTTTCCTCATGGCATTTTCTTTTTCTCATTTCAGGATAGAACAAGTGAGATTAAACAGAAAAGATGGAATAGCCAAAGTGCTCGGAACCATCTGTTGTGTGGCTGGAGCCACGGTAATAACCCTATACAAGGGGCCGACAATATATAGCCCATCAGCTTCGCTACAAACCACAAGAGCAGCAATGGCTATATCTCTTGGCGATGCTCAGGGAAAGAACTGGACTCTGGGCTGTGTCTATCTGATCGGCCATTGCCTGTCGTGGTCAGGTTGGCTCGTTTTGCAGGCGCCGGTTCTGAAAAAATACCCTGCTCGGCTTTCAGTCACTTCCTACACTTGCTTCTTTGGGCTGATACAGTTCGTCATTATAGCTGTTTCCGTCGAGAGAGATGCTCAGGCTTGGCTTTTCCACTCTGGAGGAGAAATCTTTAGCGTCTTATATGCAGGAATAGTGGCTTCTGGGATAGCATTTGCAGTTCAGATATGGTGCATTGACAGGGGTGGTCCAGTCTTCGTCGCTGTTTATCAACCTGTTCAAACTCTTGTTGTTGCGGTCATGGCTTCCATTGCTTTGGGAGAAGAGTTTTACTTGGGAGGGATCCTAGGAGCAGTGCTGATAATAGTGGGATTGTACTTCGTTCTTTGGGGTAAGAGCGAAGAGAGGAAATTCTTGCAGCAAAAGGCAGTGATTCAGTCCGGTCCGGAGCACGGTGGCAGCCGTTCTATCAGGACGCCACTCCTCCCGCCGGCAATGGCAACTGAAGATGTTTAA 1146 47.91 MADSSSAPARRMWCSVPEKIQLHGAMLALQFGYAGFHVVSRFALNMGISKLVFPVYRNIIALILLVPFAYFLEKKERPPISLNFLLQFFFLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAFSFSHFRIEQVRLNRKDGIAKVLGTICCVAGATVITLYKGPTIYSPSASLQTTRAAMAISLGDAQGKNWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFVIIAVSVERDAQAWLFHSGGEIFSVLYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAVMASIALGEEFYLGGILGAVLIIVGLYFVLWGKSEERKFLQQKAVIQSGPEHGGSRSIRTPLLPPAMATEDV 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51015818 51017693 - Bda003775.1 Bda01g01518 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01518 381 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Bda01g01518 381 Pfam EamA-like transporter family 201 339 IPR000620 GO:0016020|GO:0016021
Bda01g01518 381 Pfam EamA-like transporter family 28 166 IPR000620 GO:0016020|GO:0016021
Bda01g01518 381 PANTHER WAT1-RELATED PROTEIN 14 358 - -
Bda01g01518 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 169 - -
Bda01g01518 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 258 344 - -
Bda01g01518 381 MobiDBLite consensus disorder prediction 358 381 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g00511 Bda01g01518 CCT
Bda01g00511 Bda01g01518 ECH
Bda01g01518 Bda01g00511 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01518 Bda-Chr1:51015818 Bda03g00845 Bda-Chr3:7300685 8.27E-79 dispersed
Bda08g00585 Bda-Chr8:5960587 Bda01g01518 Bda-Chr1:51015818 1.52E-34 dispersed
Bda01g00511 Bda-Chr1:32098394 Bda01g01518 Bda-Chr1:51015818 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01518 - - jre:108991375 607.446