Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01522 ATGGCAACGGTTACTTTCTTCTTCCTCTTCGCTCTTCTGTTCTTCACCGCCTCCACGTTTGCGCAGCGTAGCGCTGAATCGACGGCCGAGATCCGAGCACTGGTGTCCTTCAAGGCCAACCTCCACGATCCTCTCGGCGCTCTGGACGGTTGGGATTTATCCACACCGTCTGCACCTTGTGACTGGCGAGGTATACTTTGTTTCAACTTCCGAGTTCGTGAACTTCGCTTGCCTCGTCTCCAACTAGCCGGACGACTCAGCGATCAGCTGGGTAACTTACGCGAGCTTCGTAAGTTAAGCCTTCACTCCAACCGCCTCAATGGCTCTCTACCTTCTTCTCTGTCGCAATGCGCTTTGCTTCGCGCTGTTTATTTGCAGTATAACTCCTTCTCCGGAAACCTTTCTCCAGCGATCTTGAACCTTTCGAACATTCAAGTTCTTAATGTTGCTCACAATCTCCTATCTGGAAAAATTTCCGGCCAGCTATCGCAGAATCTCCTGTTTCTGGATTTATCCTCAAATTCGTTCTCCGGCGAGATTCCCGGAAACTTCTCGGCCGGCTCACACGTCCAGCTCATTAATCTATCGTTTAATGCATTCTCCGGCGACGTTCCGGCCACCATAGGTGAGCTTCAGGACCTTCAGTATCTATGGCTGGACTCGAATCGATTGTATGGAACACTGCCTTCTGCACTTGCCAACTGCTCCTCGCTCATGCATTTCAGCGCTGAAGATAACGACCTCAGAGGTCTTATTCCGGCGTCTCTTGCGGCGATTCCTAATCTTCAAGTGCTCTCACTGTCACGAAATGGACTGACTGGATTGGTCCCCACATCACTTCTATGCAATTACTCAGCCACTTTCTCTTCTCTGAGAATTGTTCAGCTTGGATTTAATGCACTCACGAGCATCGCTAAGCCGCCAAATGGGGAATGTGTAAGCGTTTTGGAGGTTTTGGAGCTTAAAGAGAATCACATTCACGGCATGTTCCCGTCTTGGTTAACAAATGTGATCACACTAGGGGCATTAGATCTTTCTGGAAACTTCTTCGCCGGCAGATTGCCTGTTGAGATTGGAAATCTTTTGAGGTTGGAGGAGCTTAGATTGGCGAATAATTCACTTTCTGGGGAAGTTCCGAATGCGATTTTGAACTGTAGTCTCTTGCAGGTCATTGATCTCGAAGATAACAGATTTTCAGGTCAAATCCCATGGTTTTTTGAAAGACTGAAGAACCTAAAGTCATTATCCCTAGGAGGAAATCTATTCTCTGGCTCCATTCCTCCGAGTTTTGGAAGAATTTCAGGGCTGGAAGTATTGAATTTGAGAAACAATAATCTTACTGGAAGTATACCAAAAGAGCTGCAGCTACTGAGCAATCTGACGAGTTTGAACCTCAGTAATAACCGGTTTTATGGTGTACTTTTTTCAAACATTGGGAACTTGAAGAACTTACAGATCCTAAATTTGAGTAACTGTGGACTTTCAGGGAAAATTCCTGCTAGTATTGGTAGTATGATGAAGCTAAGTGTGCTTGATTTGAGTAATCAAAATCTGTCTGACCAGTTGCCAATTGAGATTTTTGGGTTGCCTAGTCTTCAAATTATTTCACTGGGAAGGAACAAGCTTTCTGGGAACGTTCCTGAAGGTTTTAGCAGCTTAGTTAGCTTGCAATATCTGAATCTCAGTTCCAATTCATTCACCGGTGAGATTCCAAAAAGTTATGGATTTCTTGAATCATTAGTTGTTCTATCCCTGTCTGACAATCGTATTTCTGGTGCCCTCACACCAGATATTGGTAATTGCACTGCTCTTGAAGTGCTTGAGATTCGTTCTAATTATTTGACGAGCAGTATTCCTAGTGAAATCTCTAGCCTATCTAATTTGAAAGAGCTTGACTTGGGTCGGAATAACTTGACTGGTGAAATTCCAAAACAGATTTCCCAATGCTCTTCTTTGACTTCTTTTGTTGCTAGATATGAATCATCTTTCCTCCCAAATACCAGACTCATTGTCGAATTTGTTGAATCTTACGAGATTAAATCTCTCCTCCAACAATTTGACTGGAGTCATCCCTGCAAATCTTTCAGGCATACCCGGATTGAAGTTCCTGAATTTGTCAAATAA 2124 44.21 MATVTFFFLFALLFFTASTFAQRSAESTAEIRALVSFKANLHDPLGALDGWDLSTPSAPCDWRGILCFNFRVRELRLPRLQLAGRLSDQLGNLRELRKLSLHSNRLNGSLPSSLSQCALLRAVYLQYNSFSGNLSPAILNLSNIQVLNVAHNLLSGKISGQLSQNLLFLDLSSNSFSGEIPGNFSAGSHVQLINLSFNAFSGDVPATIGELQDLQYLWLDSNRLYGTLPSALANCSSLMHFSAEDNDLRGLIPASLAAIPNLQVLSLSRNGLTGLVPTSLLCNYSATFSSLRIVQLGFNALTSIAKPPNGECVSVLEVLELKENHIHGMFPSWLTNVITLGALDLSGNFFAGRLPVEIGNLLRLEELRLANNSLSGEVPNAILNCSLLQVIDLEDNRFSGQIPWFFERLKNLKSLSLGGNLFSGSIPPSFGRISGLEVLNLRNNNLTGSIPKELQLLSNLTSLNLSNNRFYGVLFSNIGNLKNLQILNLSNCGLSGKIPASIGSMMKLSVLDLSNQNLSDQLPIEIFGLPSLQIISLGRNKLSGNVPEGFSSLVSLQYLNLSSNSFTGEIPKSYGFLESLVVLSLSDNRISGALTPDIGNCTALEVLEIRSNYLTSSIPSEISSLSNLKELDLGRNNLTGEIPKQISQCSSLTSFVARYESSFLPNTRLIVEFVESYEIKSLLQQFDWSHPCKSFRHTRIEVPEFVK 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51130670 51132793 + Bda003781.1 Bda01g01522 1522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01522 707 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Bda01g01522 707 PANTHER LRR RECEPTOR-LIKE KINASE 603 653 - -
Bda01g01522 707 PANTHER LRR RECEPTOR-LIKE KINASE 3 608 - -
Bda01g01522 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 608 - -
Bda01g01522 707 ProSiteProfiles Leucine-rich repeat profile. 435 457 IPR001611 GO:0005515
Bda01g01522 707 Pfam Leucine Rich Repeat 363 385 IPR001611 GO:0005515
Bda01g01522 707 Pfam Leucine Rich Repeat 483 504 IPR001611 GO:0005515
Bda01g01522 707 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Bda01g01522 707 Gene3D Ribonuclease Inhibitor 474 571 IPR032675 -
Bda01g01522 707 Gene3D Ribonuclease Inhibitor 186 310 IPR032675 -
Bda01g01522 707 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 603 653 - -
Bda01g01522 707 SUPERFAMILY L domain-like 27 331 - -
Bda01g01522 707 Gene3D Ribonuclease Inhibitor 382 473 IPR032675 -
Bda01g01522 707 Gene3D Ribonuclease Inhibitor 311 381 IPR032675 -
Bda01g01522 707 Gene3D Ribonuclease Inhibitor 572 675 IPR032675 -
Bda01g01522 707 Pfam Leucine rich repeat 603 654 IPR001611 GO:0005515
Bda01g01522 707 Pfam Leucine rich repeat 507 565 IPR001611 GO:0005515
Bda01g01522 707 Pfam Leucine rich repeat 411 470 IPR001611 GO:0005515
Bda01g01522 707 SMART LRR_typ_2 211 235 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 141 165 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 288 312 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 93 117 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 481 505 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 529 552 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 361 385 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 259 282 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 625 649 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 577 601 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 409 432 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 433 456 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 457 477 IPR003591 -
Bda01g01522 707 SMART LRR_typ_2 553 575 IPR003591 -
Bda01g01522 707 ProSiteProfiles Leucine-rich repeat profile. 261 282 IPR001611 GO:0005515
Bda01g01522 707 SUPERFAMILY RNI-like 319 659 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01522 Bda-Chr1:51130670 Bda14g00805 Bda-Chr14:6201500 1.20E-21 dispersed
Bda01g01522 Bda-Chr1:51130670 Bda10g00176 Bda-Chr10:5499092 4.30E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01522 - - jre:108991311 869.381